Gene
RNA
| Item | Value |
|---|---|
| gene id | G1264551 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 17875298 ~ 17875544 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1444830 | True | 247 | lncRNA | 0.34 | 1 | 17875298 | 17875544 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489719 | LOC106590432 | coding | upstream | 233490 | 17537295 ~ 17641808 (+) |
| LOC110490933 | LOC106590429 | coding | upstream | 402336 | 17244157 ~ 17472962 (+) |
| LOC118938946 | NA | coding | upstream | 644738 | 17228750 ~ 17230560 (+) |
| ggh | LOC106590426 | coding | upstream | 1155589 | 16716150 ~ 16719709 (+) |
| LOC100136240 | LOC100136240 | coding | upstream | 1188650 | 16680278 ~ 16686648 (+) |
| LOC110489724 | LOC106590359 | coding | downstream | 114301 | 17989845 ~ 18092131 (+) |
| dnah5l | LOC106590358 | coding | downstream | 226143 | 18101687 ~ 18171361 (+) |
| LOC110489727 | LOC106590362 | coding | downstream | 352285 | 18227829 ~ 18275594 (+) |
| LOC110489731 | LOC106590368 | coding | downstream | 430670 | 18306214 ~ 18325293 (+) |
| scn5lab | LOC106590371 | coding | downstream | 514613 | 18390157 ~ 18580116 (+) |
| G1264545 | NA | non-coding | upstream | 3785 | 17871291 ~ 17871513 (+) |
| G1264498 | NA | non-coding | upstream | 43328 | 17831717 ~ 17831970 (+) |
| G1264497 | NA | non-coding | upstream | 44047 | 17831039 ~ 17831251 (+) |
| G1264440 | NA | non-coding | upstream | 82823 | 17792160 ~ 17792475 (+) |
| G1264433 | NA | non-coding | upstream | 88771 | 17786255 ~ 17786527 (+) |
| G1264561 | NA | non-coding | downstream | 8557 | 17884101 ~ 17884302 (+) |
| G1264580 | LOC106586415 | non-coding | downstream | 22340 | 17897884 ~ 17898299 (+) |
| G1264616 | NA | non-coding | downstream | 57346 | 17932890 ~ 17933126 (+) |
| G1264862 | NA | non-coding | downstream | 235198 | 18110742 ~ 18111891 (+) |
| G1264873 | NA | non-coding | downstream | 262346 | 18137890 ~ 18138106 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 1981134 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 2138881 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 2168759 | 15696896 ~ 15706601 (+) |
| LOC110489660 | pan3 | other | upstream | 2680353 | 15166247 ~ 15194945 (+) |
| G1260946 | LOC106590444 | other | upstream | 2853245 | 15020992 ~ 15022053 (+) |
| LOC110489737 | LOC106590377 | other | downstream | 984567 | 18859697 ~ 18866106 (+) |
| epb41l3a | LOC106590342 | other | downstream | 1798569 | 19598284 ~ 19680110 (+) |
| G1267949 | pck2 | other | downstream | 2964751 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 3910677 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 5257315 | 23132828 ~ 23146739 (+) |
