G1264862


Basic Information

Item Value
gene id G1264862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18110742 ~ 18111891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1445151
atatatatatatacagttaattacattataaaacatacatatagactttatatagacagtatgtgaTGGGACGaacagacattatggacagtatgtgatgggatgtacatacagtatgtaacgGGATGaacagacattatggacagtatgtgatgGGATGaacagacattatggacagtatgtggtggGATGaacagacattatggacagtatgtggtgggatgcacatacagtatgtgatggAATGtacagacattatggacagtatgtggtgggatgtacatacagtatgtgatggGATGaacagacattatggacagtatgtggtggGATGaacagacattatggacagtatgtggtggGATGcacagacattatggacagtatgtggtgggatgcacatacagtatgtgatggAATGtacagacattatggacagtatgtggtgggatgtacatacagtatgtgatggaatgtacagacattatgtacatacagtatgtgatggGATGaacagacattatggacagtatatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1445151 True 537 lncRNA 0.39 2 18110742 18111891

Neighbor

gene id symbol gene type direction distance location
LOC110489724 LOC106590359 coding upstream 18611 17989845 ~ 18092131 (+)
LOC110489719 LOC106590432 coding upstream 468934 17537295 ~ 17641808 (+)
LOC110490933 LOC106590429 coding upstream 637780 17244157 ~ 17472962 (+)
LOC118938946 NA coding upstream 880182 17228750 ~ 17230560 (+)
ggh LOC106590426 coding upstream 1391033 16716150 ~ 16719709 (+)
LOC110489727 LOC106590362 coding downstream 115938 18227829 ~ 18275594 (+)
LOC110489731 LOC106590368 coding downstream 194323 18306214 ~ 18325293 (+)
scn5lab LOC106590371 coding downstream 278266 18390157 ~ 18580116 (+)
LOC110489736 LOC106590352 coding downstream 738740 18850631 ~ 18855321 (+)
LOC110489737 LOC106590377 coding downstream 747806 18859697 ~ 18866106 (+)
G1264616 NA non-coding upstream 177616 17932890 ~ 17933126 (+)
G1264580 LOC106586415 non-coding upstream 212443 17897884 ~ 17898299 (+)
G1264561 NA non-coding upstream 226440 17884101 ~ 17884302 (+)
G1264551 NA non-coding upstream 235198 17875298 ~ 17875544 (+)
G1264545 NA non-coding upstream 239229 17871291 ~ 17871513 (+)
G1264873 NA non-coding downstream 25999 18137890 ~ 18138106 (+)
G1264857 NA non-coding downstream 53040 18164931 ~ 18165489 (+)
G1264958 NA non-coding downstream 78952 18190843 ~ 18191049 (+)
G1264961 NA non-coding downstream 81227 18193118 ~ 18193395 (+)
G1264977 NA non-coding downstream 106445 18218336 ~ 18218543 (+)
mcmdc2 mcmdc2 other upstream 2216578 15885437 ~ 15895996 (+)
G1261980 NA other upstream 2374325 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 2404203 15696896 ~ 15706601 (+)
LOC110489660 pan3 other upstream 2915797 15166247 ~ 15194945 (+)
G1260946 LOC106590444 other upstream 3088689 15020992 ~ 15022053 (+)
epb41l3a LOC106590342 other downstream 1562222 19598284 ~ 19680110 (+)
G1267949 pck2 other downstream 2728404 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 3674330 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 5020968 23132828 ~ 23146739 (+)

Expression


Co-expression Network