G1264908 (LOC106590358)



Basic Information


Item Value
gene id G1264908
gene name LOC106590358
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18132878 ~ 18133093 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1445199
TTTTTGTCTCCCTTGCTGAACCCCAGTGCTTCCTCTGCATCCCTGGTCCAGATCATCTGGATGCCCAGCAGACCCACCTGGGCTGGGAACACAGACTGGAACTCCACCAGCTTTAGTCCTGCGTCACTGATGGACATGTGAGCCTGCCGGATAATGCCATGGATGGTCTTCCTCACTCTGTCCAGCAAGAGCCCCAGCCAGGCTTCTACATTTCCC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1445199 True 216 lncRNA 0.56 1 18132878 18133093

Neighbor


gene id symbol gene type direction distance location
LOC118938947 NA coding downstream 34979 18096724 ~ 18097899 (-)
LOC110489722 LOC106590357 coding downstream 376356 17751248 ~ 17756522 (-)
LOC110489721 LOC106590355 coding downstream 386580 17742649 ~ 17746298 (-)
bcl2a LOC106590353 coding downstream 404088 17661711 ~ 17728790 (-)
LOC110489717 LOC106590430 coding downstream 604868 17476964 ~ 17528010 (-)
cavin4b LOC106590360 coding upstream 36629 18169722 ~ 18178814 (-)
LOC110489726 LOC106590361 coding upstream 62982 18196075 ~ 18208500 (-)
LOC110489728 NA coding upstream 142383 18275476 ~ 18291919 (-)
LOC110489729 LOC106590364 coding upstream 158934 18292027 ~ 18301287 (-)
unm_hu7910 LOC106590366 coding upstream 192217 18325310 ~ 18369234 (-)
G1264905 LOC106590358 non-coding downstream 2126 18130498 ~ 18130752 (-)
G1264904 NA non-coding downstream 3509 18129150 ~ 18129369 (-)
G1264893 NA non-coding downstream 20994 18111336 ~ 18111884 (-)
G1264847 NA non-coding downstream 40178 18092289 ~ 18092700 (-)
G1264780 NA non-coding downstream 137742 17993783 ~ 17995136 (-)
G1264909 NA non-coding upstream 240 18133333 ~ 18133534 (-)
G1264911 NA non-coding upstream 2988 18136081 ~ 18136747 (-)
G1264913 NA non-coding upstream 4767 18137860 ~ 18138183 (-)
G1264920 NA non-coding upstream 11331 18144424 ~ 18144629 (-)
G1264921 LOC106590358 non-coding upstream 11662 18144755 ~ 18145186 (-)
G1264199 LOC106590429 other downstream 669901 17461828 ~ 17462977 (-)
G1263444 NA other downstream 1486461 16645644 ~ 16646417 (-)
G1262745 NA other downstream 1856326 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 2097756 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 2287737 15821701 ~ 15845199 (-)
G1265249 NA other upstream 50698 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 443446 18576539 ~ 18580163 (-)
G1266471 NA other upstream 975466 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 1301925 19435018 ~ 19453770 (-)
G1267414 NA other upstream 2134873 20267966 ~ 20268488 (-)

Expression



Co-expression Network