Gene
RNA
| Item | Value |
|---|---|
| gene id | G1264873 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 18137890 ~ 18138106 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1445162 | True | 217 | lncRNA | 0.60 | 1 | 18137890 | 18138106 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489724 | LOC106590359 | coding | upstream | 45759 | 17989845 ~ 18092131 (+) |
| LOC110489719 | LOC106590432 | coding | upstream | 496082 | 17537295 ~ 17641808 (+) |
| LOC110490933 | LOC106590429 | coding | upstream | 664928 | 17244157 ~ 17472962 (+) |
| LOC118938946 | NA | coding | upstream | 907330 | 17228750 ~ 17230560 (+) |
| ggh | LOC106590426 | coding | upstream | 1418181 | 16716150 ~ 16719709 (+) |
| LOC110489727 | LOC106590362 | coding | downstream | 89723 | 18227829 ~ 18275594 (+) |
| LOC110489731 | LOC106590368 | coding | downstream | 168108 | 18306214 ~ 18325293 (+) |
| scn5lab | LOC106590371 | coding | downstream | 252051 | 18390157 ~ 18580116 (+) |
| LOC110489736 | LOC106590352 | coding | downstream | 712525 | 18850631 ~ 18855321 (+) |
| LOC110489737 | LOC106590377 | coding | downstream | 721591 | 18859697 ~ 18866106 (+) |
| G1264862 | NA | non-coding | upstream | 25999 | 18110742 ~ 18111891 (+) |
| G1264616 | NA | non-coding | upstream | 204764 | 17932890 ~ 17933126 (+) |
| G1264580 | LOC106586415 | non-coding | upstream | 239591 | 17897884 ~ 17898299 (+) |
| G1264561 | NA | non-coding | upstream | 253588 | 17884101 ~ 17884302 (+) |
| G1264551 | NA | non-coding | upstream | 262346 | 17875298 ~ 17875544 (+) |
| G1264857 | NA | non-coding | downstream | 26825 | 18164931 ~ 18165489 (+) |
| G1264958 | NA | non-coding | downstream | 52737 | 18190843 ~ 18191049 (+) |
| G1264961 | NA | non-coding | downstream | 55012 | 18193118 ~ 18193395 (+) |
| G1264977 | NA | non-coding | downstream | 80230 | 18218336 ~ 18218543 (+) |
| G1264985 | NA | non-coding | downstream | 140644 | 18278750 ~ 18279651 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 2243726 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 2401473 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 2431351 | 15696896 ~ 15706601 (+) |
| LOC110489660 | pan3 | other | upstream | 2942945 | 15166247 ~ 15194945 (+) |
| G1260946 | LOC106590444 | other | upstream | 3115837 | 15020992 ~ 15022053 (+) |
| epb41l3a | LOC106590342 | other | downstream | 1536007 | 19598284 ~ 19680110 (+) |
| G1267949 | pck2 | other | downstream | 2702189 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 3648115 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 4994753 | 23132828 ~ 23146739 (+) |
