G1264921 (LOC106590358)


Basic Information

Item Value
gene id G1264921
gene name LOC106590358
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18144755 ~ 18145186 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1445212
CCTCGAAGAAGACCAGGTCCATGGCACTGCCTCTGACTGCCTCGTTGTACTGCAGTTGGAACGTGGCGAGGCGCTCCGACAGGGCCTGGAAGGACGGGATGGGCTCATAGACCTTGGGGGCCTCCAGCTCCATGTCCTCTGGCTCCTCCCCTGTGGTCTCGGGGGCATCCTTCAGGAAGTCCACAAAGTAAGCCTCCCACTGGGGGTGCTCTATCATGGCTGTTCCATGCTCCTCCACTGTAACCTAAGGGAAACAGCTCTCTGTGGTTGGTAACCAGTTTGATAATGTGTTTAACTATGCTTTCTTTATAAATATGCTTTCAGAAATATAGTGAGAAAGATGTAGTGTTATTAAAAGTAAAATATGAAATCAAAACACTTGTCATTCTATAACGAAACTAGgccaatttaaaaaaatctagAATTATAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1445212 True 432 lncRNA 0.46 1 18144755 18145186

Neighbor

gene id symbol gene type direction distance location
LOC118938947 NA coding downstream 46856 18096724 ~ 18097899 (-)
LOC110489722 LOC106590357 coding downstream 388233 17751248 ~ 17756522 (-)
LOC110489721 LOC106590355 coding downstream 398457 17742649 ~ 17746298 (-)
bcl2a LOC106590353 coding downstream 415965 17661711 ~ 17728790 (-)
LOC110489717 LOC106590430 coding downstream 616745 17476964 ~ 17528010 (-)
cavin4b LOC106590360 coding upstream 24536 18169722 ~ 18178814 (-)
LOC110489726 LOC106590361 coding upstream 50889 18196075 ~ 18208500 (-)
LOC110489728 NA coding upstream 130290 18275476 ~ 18291919 (-)
LOC110489729 LOC106590364 coding upstream 146841 18292027 ~ 18301287 (-)
unm_hu7910 LOC106590366 coding upstream 180124 18325310 ~ 18369234 (-)
G1264920 NA non-coding downstream 126 18144424 ~ 18144629 (-)
G1264913 NA non-coding downstream 6572 18137860 ~ 18138183 (-)
G1264911 NA non-coding downstream 8008 18136081 ~ 18136747 (-)
G1264909 NA non-coding downstream 11221 18133333 ~ 18133534 (-)
G1264908 LOC106590358 non-coding downstream 11662 18132878 ~ 18133093 (-)
G1264924 LOC106590358 non-coding upstream 1166 18146352 ~ 18147145 (-)
G1264926 NA non-coding upstream 2737 18147923 ~ 18148139 (-)
G1264927 NA non-coding upstream 3025 18148211 ~ 18148795 (-)
G1264931 NA non-coding upstream 6260 18151446 ~ 18151738 (-)
G1264933 NA non-coding upstream 9182 18154368 ~ 18154589 (-)
G1264199 LOC106590429 other downstream 681778 17461828 ~ 17462977 (-)
G1263444 NA other downstream 1498338 16645644 ~ 16646417 (-)
G1262745 NA other downstream 1868203 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 2109633 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 2299614 15821701 ~ 15845199 (-)
G1265249 NA other upstream 38605 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 431353 18576539 ~ 18580163 (-)
G1266471 NA other upstream 963373 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 1289832 19435018 ~ 19453770 (-)
G1267414 NA other upstream 2122780 20267966 ~ 20268488 (-)

Expression


Co-expression Network