G1264931


Basic Information

Item Value
gene id G1264931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18151446 ~ 18151738 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1445222
gctgcaccttggtcctcctctccttccccagacgacaagcgttacaaAATACAAATACCTAAGTCCATATTCAGATGTCGGATCTTCATTTGAAGATCACCTGTATTGTTTGAGGTTTAAAaatgcttctgaagtttgtcatttccgcTTTGACATTGCAAACTTGATTTTGCCCTGCCCAAAAAATGTTTTGACCCCTACAAAactgtccattaattataatccaaataaaaattcacaattcttgttgctgcaggattattttcctgctgtagcaaactggctcaaaaaAT

Function

NR:

description
nucleotide-binding oligomerization domain-containing protein 2 isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1445222 True 293 lncRNA 0.38 1 18151446 18151738

Neighbor

gene id symbol gene type direction distance location
LOC118938947 NA coding downstream 53547 18096724 ~ 18097899 (-)
LOC110489722 LOC106590357 coding downstream 394924 17751248 ~ 17756522 (-)
LOC110489721 LOC106590355 coding downstream 405148 17742649 ~ 17746298 (-)
bcl2a LOC106590353 coding downstream 422656 17661711 ~ 17728790 (-)
LOC110489717 LOC106590430 coding downstream 623436 17476964 ~ 17528010 (-)
cavin4b LOC106590360 coding upstream 17984 18169722 ~ 18178814 (-)
LOC110489726 LOC106590361 coding upstream 44337 18196075 ~ 18208500 (-)
LOC110489728 NA coding upstream 123738 18275476 ~ 18291919 (-)
LOC110489729 LOC106590364 coding upstream 140289 18292027 ~ 18301287 (-)
unm_hu7910 LOC106590366 coding upstream 173572 18325310 ~ 18369234 (-)
G1264927 NA non-coding downstream 2651 18148211 ~ 18148795 (-)
G1264926 NA non-coding downstream 3307 18147923 ~ 18148139 (-)
G1264924 LOC106590358 non-coding downstream 4301 18146352 ~ 18147145 (-)
G1264921 LOC106590358 non-coding downstream 6260 18144755 ~ 18145186 (-)
G1264920 NA non-coding downstream 6817 18144424 ~ 18144629 (-)
G1264933 NA non-coding upstream 2630 18154368 ~ 18154589 (-)
G1264935 LOC103367559 non-coding upstream 4663 18156401 ~ 18157149 (-)
G1264936 NA non-coding upstream 6413 18158151 ~ 18158801 (-)
G1264937 LOC106590358 non-coding upstream 7215 18158953 ~ 18159308 (-)
G1264938 LOC106590358 non-coding upstream 8546 18160284 ~ 18160799 (-)
G1264199 LOC106590429 other downstream 688469 17461828 ~ 17462977 (-)
G1263444 NA other downstream 1505029 16645644 ~ 16646417 (-)
G1262745 NA other downstream 1874894 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 2116324 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 2306305 15821701 ~ 15845199 (-)
G1265249 NA other upstream 32053 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 424801 18576539 ~ 18580163 (-)
G1266471 NA other upstream 956821 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 1283280 19435018 ~ 19453770 (-)
G1267414 NA other upstream 2116228 20267966 ~ 20268488 (-)

Expression


Co-expression Network