G1264935 (LOC103367559)



Basic Information


Item Value
gene id G1264935
gene name LOC103367559
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18156401 ~ 18157149 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1445226
GTTAAGACCTTGTATCTATATGGACAAATGGGACAAGAACAGTGAAGAGTGTAGCTGAGTCTTACTTCACTGTAGGGGATGTGGTGGCTGCTCATCTCCTTTCTCCAGAGCTGCAGCAGTAGGTTGCGGTATTCCTGGTTAAAGGGACCAGCGTAGGACAGGAAGCCAGTAGCCAGCAACACGTCTCCAACCAGGTGTCTGATCTGAGTCTGGAACAGGGCACTGCTCTCGGTCCAGCGGATCTGACAGACAAACACAACAAGATAGACGAATGGAGATGTCAACAACAATATGGCATGACAGTTTGAGGAGTTGGCTAAAGCTCCTCACCTTCTCACCACCAAGCCCGTCGATTAGTGCGGTGGCGTTGGCCATCTTGCGTCGGCAGACCGTGGCGTCGTCCATTAGGGTCTGCTTCTCCCTCATGGCGGCGTCATAGAGCGCCTGCACTTCATCCAGCTCCCGCTGCTTAGCGTCTAGCTGCTCCTGGGCCCGGGACAACTCCCCCTGGGCCACACCAAGTCGGGCCTCCTGCAGGGTCAGGTTGGCCTGGGGacatatttaaaataattggTTTGGTGAGTAACCTTGTTTGAGAACTGAGGACTTGCGTTAGCTCCCTGAGCTAATGACTAGGCTGTATGtaactcagtgggctaacacagacTTGCACAGTAGTGTGCAGAAGACCTGGGTTTTTACCCAGCCAGTCAAGGGGGGGTGAGGTGTAAtgtgaggtcacttagaaa

Function


NR:

description
PREDICTED: dynein heavy chain 5, axonemal-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1445226 True 749 lncRNA 0.53 1 18156401 18157149

Neighbor


gene id symbol gene type direction distance location
LOC118938947 NA coding downstream 58502 18096724 ~ 18097899 (-)
LOC110489722 LOC106590357 coding downstream 399879 17751248 ~ 17756522 (-)
LOC110489721 LOC106590355 coding downstream 410103 17742649 ~ 17746298 (-)
bcl2a LOC106590353 coding downstream 427611 17661711 ~ 17728790 (-)
LOC110489717 LOC106590430 coding downstream 628391 17476964 ~ 17528010 (-)
cavin4b LOC106590360 coding upstream 12573 18169722 ~ 18178814 (-)
LOC110489726 LOC106590361 coding upstream 38926 18196075 ~ 18208500 (-)
LOC110489728 NA coding upstream 118327 18275476 ~ 18291919 (-)
LOC110489729 LOC106590364 coding upstream 134878 18292027 ~ 18301287 (-)
unm_hu7910 LOC106590366 coding upstream 168161 18325310 ~ 18369234 (-)
G1264933 NA non-coding downstream 1812 18154368 ~ 18154589 (-)
G1264931 NA non-coding downstream 4663 18151446 ~ 18151738 (-)
G1264927 NA non-coding downstream 7606 18148211 ~ 18148795 (-)
G1264926 NA non-coding downstream 8262 18147923 ~ 18148139 (-)
G1264924 LOC106590358 non-coding downstream 9256 18146352 ~ 18147145 (-)
G1264936 NA non-coding upstream 1002 18158151 ~ 18158801 (-)
G1264937 LOC106590358 non-coding upstream 1804 18158953 ~ 18159308 (-)
G1264938 LOC106590358 non-coding upstream 3135 18160284 ~ 18160799 (-)
G1264940 LOC106590358 non-coding upstream 8932 18166081 ~ 18166405 (-)
G1264941 NA non-coding upstream 10161 18167310 ~ 18167516 (-)
G1264199 LOC106590429 other downstream 693424 17461828 ~ 17462977 (-)
G1263444 NA other downstream 1509984 16645644 ~ 16646417 (-)
G1262745 NA other downstream 1879849 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 2121279 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 2311260 15821701 ~ 15845199 (-)
G1265249 NA other upstream 26642 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 419390 18576539 ~ 18580163 (-)
G1266471 NA other upstream 951410 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 1277869 19435018 ~ 19453770 (-)
G1267414 NA other upstream 2110817 20267966 ~ 20268488 (-)

Expression



Co-expression Network