G1264938 (LOC106590358)


Basic Information

Item Value
gene id G1264938
gene name LOC106590358
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18160284 ~ 18160799 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1445229
CCAGACTCGAGGAAAGATTCATAACGTTTGGGTTGTTCTGGGTCAAAAGCTTTTGCTGTATGTgggaaattacattttttttcaagGGGTAAATACAAACTAGTATCTTGAAAATACACTGATGTGCATTTTttctgttgaaacaaaaatatattgtTGCTAATAGCACAGGAAATGTTGACTGAGCAGACACTGACCCAATTCGTACGTGAGGTCTAAATAACAACAGATAGGCCCACCCACCTGCGCAATGGTCCGGTCGGGGCACCAGCTCCTGATCAACAATAACTTCCTGAATGTGTCCAGCATGCTGTCGTATCCGTCAGGCACCGGGGCCTCCTCGGGGGCAGGCTCGTCGAACCAGGCCCTCCAGGAGCGGTCGTTGTGGGTGACCTGGGTCAGCAGCTGGGTGAAGGGGTGCACGCTGGACAGCTGAACCAGGTTCAGCCACGTTATGTCCAGGATCCAGCGCCGCGGCTTGGGCTCCACAGAGTTCAGGTCCAGGGCTGCACCTCc

Function

NR:

description
dynein heavy chain 5, axonemal-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1445229 True 516 lncRNA 0.52 1 18160284 18160799

Neighbor

gene id symbol gene type direction distance location
LOC118938947 NA coding downstream 62385 18096724 ~ 18097899 (-)
LOC110489722 LOC106590357 coding downstream 403762 17751248 ~ 17756522 (-)
LOC110489721 LOC106590355 coding downstream 413986 17742649 ~ 17746298 (-)
bcl2a LOC106590353 coding downstream 431494 17661711 ~ 17728790 (-)
LOC110489717 LOC106590430 coding downstream 632274 17476964 ~ 17528010 (-)
cavin4b LOC106590360 coding upstream 8923 18169722 ~ 18178814 (-)
LOC110489726 LOC106590361 coding upstream 35276 18196075 ~ 18208500 (-)
LOC110489728 NA coding upstream 114677 18275476 ~ 18291919 (-)
LOC110489729 LOC106590364 coding upstream 131228 18292027 ~ 18301287 (-)
unm_hu7910 LOC106590366 coding upstream 164511 18325310 ~ 18369234 (-)
G1264937 LOC106590358 non-coding downstream 976 18158953 ~ 18159308 (-)
G1264936 NA non-coding downstream 1483 18158151 ~ 18158801 (-)
G1264935 LOC103367559 non-coding downstream 3135 18156401 ~ 18157149 (-)
G1264933 NA non-coding downstream 5695 18154368 ~ 18154589 (-)
G1264931 NA non-coding downstream 8546 18151446 ~ 18151738 (-)
G1264940 LOC106590358 non-coding upstream 5282 18166081 ~ 18166405 (-)
G1264941 NA non-coding upstream 6511 18167310 ~ 18167516 (-)
G1265260 NA non-coding upstream 34702 18195501 ~ 18195730 (-)
G1265270 NA non-coding upstream 50710 18211509 ~ 18211741 (-)
G1265271 NA non-coding upstream 51721 18212520 ~ 18212841 (-)
G1264199 LOC106590429 other downstream 697307 17461828 ~ 17462977 (-)
G1263444 NA other downstream 1513867 16645644 ~ 16646417 (-)
G1262745 NA other downstream 1883732 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 2125162 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 2315143 15821701 ~ 15845199 (-)
G1265249 NA other upstream 22992 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 415740 18576539 ~ 18580163 (-)
G1266471 NA other upstream 947760 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 1274219 19435018 ~ 19453770 (-)
G1267414 NA other upstream 2107167 20267966 ~ 20268488 (-)

Expression


Co-expression Network