Gene
RNA
| Item | Value |
|---|---|
| gene id | G1264961 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 18193118 ~ 18193395 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1445255 | True | 278 | lncRNA | 0.45 | 1 | 18193118 | 18193395 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dnah5l | LOC106590358 | coding | upstream | 21757 | 18101687 ~ 18171361 (+) |
| LOC110489724 | LOC106590359 | coding | upstream | 100987 | 17989845 ~ 18092131 (+) |
| LOC110489719 | LOC106590432 | coding | upstream | 551310 | 17537295 ~ 17641808 (+) |
| LOC110490933 | LOC106590429 | coding | upstream | 720156 | 17244157 ~ 17472962 (+) |
| LOC118938946 | NA | coding | upstream | 962558 | 17228750 ~ 17230560 (+) |
| LOC110489727 | LOC106590362 | coding | downstream | 34434 | 18227829 ~ 18275594 (+) |
| LOC110489731 | LOC106590368 | coding | downstream | 112819 | 18306214 ~ 18325293 (+) |
| scn5lab | LOC106590371 | coding | downstream | 196762 | 18390157 ~ 18580116 (+) |
| LOC110489736 | LOC106590352 | coding | downstream | 657236 | 18850631 ~ 18855321 (+) |
| LOC110489737 | LOC106590377 | coding | downstream | 666302 | 18859697 ~ 18866106 (+) |
| G1264958 | NA | non-coding | upstream | 2069 | 18190843 ~ 18191049 (+) |
| G1264857 | NA | non-coding | upstream | 27629 | 18164931 ~ 18165489 (+) |
| G1264873 | NA | non-coding | upstream | 55012 | 18137890 ~ 18138106 (+) |
| G1264862 | NA | non-coding | upstream | 81227 | 18110742 ~ 18111891 (+) |
| G1264616 | NA | non-coding | upstream | 259992 | 17932890 ~ 17933126 (+) |
| G1264977 | NA | non-coding | downstream | 24941 | 18218336 ~ 18218543 (+) |
| G1264985 | NA | non-coding | downstream | 85355 | 18278750 ~ 18279651 (+) |
| G1265027 | NA | non-coding | downstream | 176377 | 18369772 ~ 18422663 (+) |
| G1265070 | NA | non-coding | downstream | 240234 | 18433629 ~ 18436883 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 2298954 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 2456701 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 2486579 | 15696896 ~ 15706601 (+) |
| LOC110489660 | pan3 | other | upstream | 2998173 | 15166247 ~ 15194945 (+) |
| G1260946 | LOC106590444 | other | upstream | 3171065 | 15020992 ~ 15022053 (+) |
| epb41l3a | LOC106590342 | other | downstream | 1480718 | 19598284 ~ 19680110 (+) |
| G1267949 | pck2 | other | downstream | 2646900 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 3592826 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 4939464 | 23132828 ~ 23146739 (+) |
