G1265371


Basic Information

Item Value
gene id G1265371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18434983 ~ 18436635 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1445708
aggttagagacagagacatgtagcagCTTTAGGGAGAGACAGAGACATGTAGCAGctttagggagagacagagacatgtagcagctttagggagagacagagacatgtagcagctttagggagagacagagacatgtaggagctttagggagagacagagacatgtagcagctttaggttagagacagagacatgtagcagctttagattagagacagagacatgtagcagCTTTAGGGAGAGACATAGACATGTAGCAGCTTTagattagagacagagacatgtagcagctttagggaaagacagagacatgtagcagctttagattagagacagagacatgtagcatctttagggagagacagagacatgtagcaactttaggttagagacagagacatgtagcagctttagattagagacagagacatgtatcagctttagggagagacagagacatgtagtAGCTTTagattagagacagagacatgtagcagctttagggaaagacagagacatgtagcatctttagggagaaacagagatatGTAGCAGCTTTagattagagacagagacatgtagcaACCTTAGATTAGAGACCGAGACATGTAGCAGctttagggagagacagagacatgtagcagctctcgggagagacagagacatgtagaAGCTTTAGGGAGAGACCGAGACATGTAACAGTTTTAGGTTAGATACAGAGAAATGTAGCAGctttagggagagacagagacatgtagcagCTTTAGGGAGAGACCGAGACATGTAGCAGCTttagttagagacagagacatgtagcagCTTCAGGTTAGATACAGAGAAATGTAGCAGctttagggagagacagagacatgtagcagctttaggttagagacagagacatgtaggagctctcgggagagacagagacatgtagcagctttagggagaaacagagacatgtagcagctttagggagagagagacatgtagcagctttaggttagagacagagacatgtagcagctttagattagagacagaaacatgtagcagctttaggttagagacagagacatgtagcagctttaggttagagacagagacatgtagcagctttcggttagagacagagacatccaGCTGctttagggagagacagagacatgtagcagctttagggagaaa

Function

NR:

description
PREDICTED: repetitive proline-rich cell wall protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1445708 True 1185 lncRNA 0.44 2 18434983 18436635

Neighbor

gene id symbol gene type direction distance location
LOC110489732 wdr48 coding downstream 50877 18373431 ~ 18384106 (-)
unm_hu7910 LOC106590366 coding downstream 65749 18325310 ~ 18369234 (-)
LOC110489729 LOC106590364 coding downstream 133696 18292027 ~ 18301287 (-)
LOC110489728 NA coding downstream 143064 18275476 ~ 18291919 (-)
LOC110489726 LOC106590361 coding downstream 226483 18196075 ~ 18208500 (-)
LOC110489734 exog coding upstream 156361 18592996 ~ 18607504 (-)
actriib actriib coding upstream 182035 18618670 ~ 18680053 (-)
xylb xylb coding upstream 350235 18786870 ~ 18849057 (-)
crygn2 LOC106590379 coding upstream 434591 18871226 ~ 18874224 (-)
LOC110489739 LOC106590380 coding upstream 446171 18882806 ~ 18916856 (-)
G1265310 NA non-coding downstream 153732 18280730 ~ 18281251 (-)
G1265271 NA non-coding downstream 222142 18212520 ~ 18212841 (-)
G1265270 NA non-coding downstream 223242 18211509 ~ 18211741 (-)
G1265260 NA non-coding downstream 239253 18195501 ~ 18195730 (-)
G1264941 NA non-coding downstream 267467 18167310 ~ 18167516 (-)
G1265452 NA non-coding upstream 135310 18571945 ~ 18572166 (-)
G1265453 NA non-coding upstream 136915 18573550 ~ 18574311 (-)
G1265454 LOC106579582 non-coding upstream 138032 18574667 ~ 18574949 (-)
G1265464 NA non-coding upstream 230431 18667066 ~ 18683212 (-)
G1265547 NA non-coding upstream 298636 18735271 ~ 18735636 (-)
G1265249 NA other downstream 250860 18183791 ~ 18184123 (-)
G1264199 LOC106590429 other downstream 972006 17461828 ~ 17462977 (-)
G1263444 NA other downstream 1788566 16645644 ~ 16646417 (-)
G1262745 NA other downstream 2158431 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 2399861 15938237 ~ 16035283 (-)
G1265456 LOC106590371 other upstream 139904 18576539 ~ 18580163 (-)
G1266471 NA other upstream 671924 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 998383 19435018 ~ 19453770 (-)
G1267414 NA other upstream 1831331 20267966 ~ 20268488 (-)
G1267452 NA other upstream 1853715 20290350 ~ 20290673 (-)

Expression


Co-expression Network