G1265453


Basic Information

Item Value
gene id G1265453
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18573550 ~ 18574311 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1445793
gaaaataacacttttttttcatGGGAGGTATCTGGTTTGTTCACATCAAACCATTTGTTGGCCATGATGCTTTTGATACTTATCTTTCGTTTCTGCTGGTTGAAGTTGTCGATGATCACCCCGATGAAGAGGTTGAGTGTGAAGAAGGAGCCaaagatgatgaagatgatgaagtATAGGTACATGTACATGTTCACCTCTCTGATAGGCTGTTCCTCCACCTAGTCCAGCCAGTGGAAAAAGCAATACATCATTCAGTTACATTTTTATCAGTTGAAATCTGTGTTATTCTGGTAAATGTTATTGTGATATTGCATCAAGGCATGGCTATGACAAAGACAGCCATTaatgaaatgaatgaaaataCCAAAGCTCTATGTACCAAACCCTTTCGATAATGTTATACAAAACAAGTACATTGGCGTTTAATACTTACAGCACGAGAATCCACTGCTGCATACATGATGTCCATCCAGCCTTTGAATGTAGCCTTGTAACAAAGGACATAAACTTCAATGGGCATGATGAGGTAATTAGGTGTGCCACTATTATCGCCATATAAACACATGCAGAGGACAAAAGATGCATTTGTATACACAATGTTCATGCAGTAAAAGATGTTCGCTTTTGACATCAGATTtgaagatacactacatgaccaaaaatatgtggacacccgttagtcaaacatctcattccaaaatcatgggcattaatatggaccaGCTTCCCCCTTCACTGCTATgacagcctccactgttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1445793 True 762 lncRNA 0.39 1 18573550 18574311

Neighbor

gene id symbol gene type direction distance location
LOC110489732 wdr48 coding downstream 189444 18373431 ~ 18384106 (-)
unm_hu7910 LOC106590366 coding downstream 204316 18325310 ~ 18369234 (-)
LOC110489729 LOC106590364 coding downstream 272263 18292027 ~ 18301287 (-)
LOC110489728 NA coding downstream 281631 18275476 ~ 18291919 (-)
LOC110489726 LOC106590361 coding downstream 365050 18196075 ~ 18208500 (-)
LOC110489734 exog coding upstream 18685 18592996 ~ 18607504 (-)
actriib actriib coding upstream 44359 18618670 ~ 18680053 (-)
xylb xylb coding upstream 212559 18786870 ~ 18849057 (-)
crygn2 LOC106590379 coding upstream 296915 18871226 ~ 18874224 (-)
LOC110489739 LOC106590380 coding upstream 308495 18882806 ~ 18916856 (-)
G1265452 NA non-coding downstream 1384 18571945 ~ 18572166 (-)
G1265371 NA non-coding downstream 136915 18434983 ~ 18436635 (-)
G1265310 NA non-coding downstream 292299 18280730 ~ 18281251 (-)
G1265271 NA non-coding downstream 360709 18212520 ~ 18212841 (-)
G1265270 NA non-coding downstream 361809 18211509 ~ 18211741 (-)
G1265454 LOC106579582 non-coding upstream 356 18574667 ~ 18574949 (-)
G1265464 NA non-coding upstream 92755 18667066 ~ 18683212 (-)
G1265547 NA non-coding upstream 160960 18735271 ~ 18735636 (-)
G1266320 NA non-coding upstream 276289 18850600 ~ 18850889 (-)
G1266325 NA non-coding upstream 285415 18859726 ~ 18860266 (-)
G1265249 NA other downstream 389427 18183791 ~ 18184123 (-)
G1264199 LOC106590429 other downstream 1110573 17461828 ~ 17462977 (-)
G1263444 NA other downstream 1927133 16645644 ~ 16646417 (-)
G1262745 NA other downstream 2296998 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 2538428 15938237 ~ 16035283 (-)
G1265456 LOC106590371 other upstream 2228 18576539 ~ 18580163 (-)
G1266471 NA other upstream 534248 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 860707 19435018 ~ 19453770 (-)
G1267414 NA other upstream 1693655 20267966 ~ 20268488 (-)
G1267452 NA other upstream 1716039 20290350 ~ 20290673 (-)

Expression


Co-expression Network