G1265456 (LOC106590371)


Basic Information

Item Value
gene id G1265456
gene name LOC106590371
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18576539 ~ 18580163 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1445798
atataatgacagaagagaagctgcatgtatctaattatggacaagttgactaacaaataccATAccaaaatgtcaggaattatcagcagaaacatatctaaatcaggCAAAAAAAATCCTGTACCCCCGTAAAGAAATCGTTCTGCCATCCCTGGCTGTAGCTTACAGTGCATTTtctatattagggttagggtcgagtgcaggcctcagattttcactatCACATGAAGTCGGGCAGTTgcagatgggttattagcaattgtgggtgcgggtgaacaaacagctgacccgcgcACCACCACCACATACATGACTCTGAAATCAAAAGAATAATCAGTGATATTGTAGGCTTTCTCATTTATTTCACAGGAGGTTGTTATCTTAAATACAGAGGCATGTGTTTGCAACATACTAAAAAAAAAACGTCAACTGAAAGTAGTAAAACTTCTTTCTGAATAATATTTACTGCAACGGGGGCTTCACTGAGGCACTGCATTGTGGTTGAGCAGTGAGAAATGCTCTGGGAATAATCATTCTAACAACAAAACGATTATATACGGACTGCTGAGAAGATGACTGTTGTAGGTTATTGCATTTCTGACAGTTTATAAGAATGAAAAATAAGCATTTTCTGTGCATGTCTTGGATGTTTTTATGATGAAGCAGCTCTCGTTAGGATGAAAACAGTGCATTTATGACAGAGATGTGCAGAGTTGACTTTTCACCATGACATTTTTGTATAAAAATGTCCCACCCAAAAACGAATAGGATCGCTCCCGACTTTTAAACATGTTCCCCAACATTCCCAATACAAAGCATGCAATCAGAAATGTCTTTAGAAAAGTCCCCGTAGACACTGGTAAATAGCAGTGCGATCCCAGTCACACACCCATGGCATCTAATGGGAGAACGATGTGAGTAGAGGTCCATTTAGAAACAGGACAGGGGTATATACCAGGCACACACTGGATCTATTGCTACAGAAAACAGCCCTTCAACACACCTGCAACCATAACCTGAAAATATATATCATATTAAAGTTGAGCGGTgtccttattattatttgagtCAAATAGAAACCAGTGTCAGTGATATAGTTGAGAGTAGGCCTAAGCTATGGGTAACCAAGAGAAGCTGAACGGTTTGTAAAATTAATGCTGTACAAACTTTGACCCTTTTATCCTAAAAAGTAGTAAATTATTGCTAAACACAGTTTGTGCAAAATAGATAAATAATTGTTTTTCAGTCTTGAGCGCAACGTCTCTATATGATGCAGTCAAAACATGCGAAACAcactttaaataaaaaataaataggaCGATTATCCGTCCGACTAATAGTGAATATAATCGCTGAtggtcatataaaatatatagcCATTGGGGCAGTTTTAATCCTACAGAAGTTATGGAGAAAGAGAAATCTGTCAATCGTAACCATGAGATAGATGTAGGTTTGATTGTCACATACAGATCATGGTTACTGCACTGCTTCTTAGTTTTGTGTAACTAGGCCCAGATTGTTATGAAAGGGAAACAACTCAAATGCAGGGCCCCGGGATATCCCGGGATATCTTTACGTGTAAACGTAAATGCAAAAATGCTCAAAATATGCTCAAATACAATGTGGTAGTACTGCAATTCAGAAGAGGCCATGTTTTTTTTCTTACtctaaaaatataaaacattttaattattGTACTGCTATGAAAGACTGGTAACATCAACAATGTTATACTTTACTACGAAAAATTGTATCCCTTAGTTTTTTTCTCACATCTCACAGTTTGAAAACTAATTATTATAAGTAATTACACCAATAATAGTAAGACCTTTAATGAACTCATAAGGTCAGGCATACTTTGTAAATATTGATAAACTGTATTTCCTTCAGTCtaataaattattattacatCAGTGATATAATTGTTGTGACCCTGCAAAGGTCATTCATGCATATTAACTGTGAAGCAAAGTTGACATGAGCAGGATCAAAGGTTATCTAGGATTACACACACCGCCTTTGTGTACTCCCTCAAAGCATGTTctccaaaaataaataaatagttagCCTTTTCTCTATGAAAACCCCTGCAGATTCTCTGGACAACCACAAGTATTAAACCAGTGTCATTTGAGCTATGTTACATTCggtaaacaacaaaaaaagaaaaaaaagcatTTCCTAGTTGCCATTACAGAAATGTCTCGCGGTCTGGTACTCTGTCGGGTGCGGGGCAATGTTCCCTCAAGTCACTGTTCCTGGACTGTTCGGAAATTAAAACTTGGAAAAGTTCACTAGTCGCCCGTGTGACGCTGTCGTAAGAcggtggagaggaggtggaggacagGGTCTCCATCAGCTCCATCTCAGGCCCCCCGTAGTGCTCCTTGATCATGGAGGCTATGAGACCCTCTTTCTCTGGAGCGGTGCCCCCCTCGCCCGTGGGGCTCTGCGTCAGACTGATCTGCATTGATCTGTACAGGAAGGAGGCTTGCTTCATTTGCCTCCGCACCAGATGCCTGCGGTAGCACCTCTGGATAACAGCGGCCGACACATCCTCCTGCTTGCGCCTCAGCGTGGTGGTGATGGGCTCGTAGGAGATCTTGGACGGATTGGCCATCATGAATTTCTCCTCCATCTGCTGTTTGAGAGCATCCATCTCGCCCGACTCGCCCAGCACGCGCTTGGTGAAGGCAAACAGAATGTCCAGGCAGTGGATCTTATCACCGCTCACCATGGGCAGGTCCATGGAGATCAGCTTGATCTTGTTGGGCTTGCCGATGCGCAGCGGCTCCGACAGCGTGTCTGCAAAGTCTGACAGCTTGGCGTACTCGATGAACTGCGTGGCTTCCGGGTCAAACTTCTCCCACACCTCGTAGAACATCTCGAAGTCGTCCTCGCTCAGCGGCTCGGTGCTCTCCTCGGTGGCCACGCTGAAGTTCTCCAGGATGATGGCGATGTACATGTTGACCACGATGAGGAAGGAAATTATGATGTAGGTGACAAAGAAGGTGATGCCCACCGAGGGGTTGCCACAGTTGCCCCGGGCATTGGTGCCTGTGTGGATGAGGTTGGGGTTGCACTCTTCCGGAGAGTTGTTGAGGATGGGGCTGAGCAGGCCGTCCCAGCCTGCCGACGTGGTGATTTGGAACAGACAGATCATACTGTTGCCGAATGTCTCGAAGTTGAACATGTCGTCGATCCCTGCCTGCTTCTTGACATAGGCAAAGTTGGCCATGCCAAAGATGGCATATATAAACATTACCAGGAAGAGCAGGAGGCCGATGTTGAACAGGGCGGGAAGGGACATCATTAAGGCAAAGAGTAAGGTCCTTATTCCTTTGGCTCCGCGGATGAGTCGCAGTACTCGTCCAATCCTGGCTAATCGAATGACTCTGAAAAGAGTGGGCGATACAAAGTACTTCTCTATGATGTCAGCGAGAACGATACCTGGAAGAAAGGAAGTGGAAAAAACATGAATGAGATTTCTGTACTTCTAATAGACCATCATGAACCATTTAACGGCATAGAGTAAGGTCAACTTTTTCacatcatttagcagatgctcttatacagagtgacttacaggagcaattaggaataagtgccttgctcaaaggca
>TU1445796
GTTGTTATCTTAAATACAGAGGCATGTGTTTGCAACATACTAAAAAAAAAACGTCAACTGAAAGTAGTAAAACTTCTTTCTGAATAATATTTACTGCAACGGGGGCTTCACTGAGGCACTGCATTGTGGTTGAGCAGTGAGAAATGCTCTGGGAATAATCATTCTAACAACAAAACGATTATATACGGACTGCTGAGAAGATGACTGTTGTAGGTTATTGCATTTCTGACAGTTTATAAGAATGAAAAATAAGCATTTTCTGTGCATGTCTTGGATGTTTTTATGATGAAGCAGCTCTCGTTAGGATGAAAACAGTGCATTTATGACAGAGATGTGCAGAGTTGACTTTTCACCATGACATTTTTGTATAAAAATGTCCCACCCAAAAACGAATAGGATCGCTCCCGACTTTTAAACATGTTCCCCAACATTCCCAATACAAAGCATGCAATCAGAAATGTCTTTAGAAAAGTCCCCGTAGACACTGGTAAATAGCAGTGCGATCCCAGTCACACACCCATGGCATCTAATGGGAGAACGATGTGAGTAGAGGTCCATTTAGAAACAGGACAGGGGTATATACCAGGCACACACTGGATCTATTGCTACAGAAAACAGCCCTTCAACACACCTGCAACCATAACCTGAAAATATATATCATATTAAAGTTGAGCGGTgtccttattattatttgagtCAAATAGAAACCAGTGTCAGTGATATAGTTGAGAGTAGGCCTAAGCTATGGGTAACCAAGAGAAGCTGAACGGTTTGTAAAATTAATGCTGTACAAACTTTGACCCTTTTATCCTAAAAAGTAGTAAATTATTGCTAAACACAGTTTGTGCAAAATAGATAAATAATTGTTTTTCAGTCTTGAGCGCAACGTCTCTATATGATGCAGTCAAAACATGCGAAACAcactttaaataaaaaataaataggaCGATTATCCGTCCGACTAATAGTGAATATAATCGCTGAtggtcatataaaatatatagcCATTGGGGCAGTTTTAATCCTACAGAAGTTATGGAGAAAGAGAAATCTGTCAATCGTAACCATGAGATAGATGTAGGTTTGATTGTCACATACAGATCATGGTTACTGCACTGCTTCTTAGTTTTGTGTAACTAGGCCCAGATTGTTATGAAAGGGAAACAACTCAAATGCAGGGCCCCGGGATATCCCGGGATATCTTTACGTGTAAACGTAAATGCAAAAATGCTCAAAATATGCTCAAATACAATGTGGTAGTACTGCAATTCAGAAGAGGCCATGTTTTTTTTCTTACtctaaaaatataaaacattttaattattGTACTGCTATGAAAGACTGGTAACATCAACAATGTTATACTTTACTACGAAAAATTGTATCCCTTAGTTTTTTTCTCACATCTCACAGTTTGAAAACTAATTATTATAAGTAATTACACCAATAATAGTAAGACCTTTAATGAACTCATAAGGTCAGGCATACTTTGTAAATATTGATAAACTGTATTTCCTTCAGTCtaataaattattattacatCAGTGATATAATTGTTGTGACCCTGCAAAGGTCATTCATGCATATTAACTGTGAAGCAAAGTTGACATGAGCAGGATCAAAGGTTATCTAGGATTACACACACCGCCTTTGTGTACTCCCTCAAAGCATGTTctccaaaaataaataaatagttagCCTTTTCTCTATGAAAACCCCTGCAGATTCTCTGGACAACCACAAGTATTAAACCAGTGTCATTTGAGCTATGTTACATTCggtaaacaacaaaaaaagaaaaaaaagcatTTCCTAGTTGCCATTACAGAAATGTCTCGCGGTCTGGTACTCTGTCGGGTGCGGGGCAATGTTCCCTCAAGTCACTGTTCCTGGACTGTTCGGAAATTAAAACTTGGAAAAGTTCACTAGTCGCCCGTGTGACGCTGTCGTAAGAcggtggagaggaggtggaggacagGGTCTCCATCAGCTCCATCTCAGGCCCCCCGTAGTGCTCCTTGATCATGGAGGCTATGAGACCCTCTTTCTCTGGAGCGGTGCCCCCCTCGCCCGTGGGGCTCTGCGTCAGACTGATCTGCATTGATCTGTACAGGAAGGAGGCTTGCTTCATTTGCCTCCGCACCAGATGCCTGCGGTAGCACCTCTGGATAACAGCGGCCGACACATCCTCCTGCTTGCGCCTCAGCGTGGTGGTGATGGGCTCGTAGGAGATCTTGGACGGATTGGCCATCATGAATTTCTCCTCCATCTGCTGTTTGAGAGCATCCATCTCGCCCGACTCGCCCAGCACGCGCTTGGTGAAGGCAAACAGAATGTCCAGGCAGTGGATCTTATCACCGCTCACCATGGGCAGGTCCATGGAGATCAGCTTGATCTTGTTGGGCTTGCCGATGCGCAGCGGCTCCGACAGCGTGTCTGCAAAGTCTGACAGCTTGGCGTACTCGATGAACTGCGTGGCTTCCGGGTCAAACTTCTCCCACACCTCGTAGAACATCTCGAAGTCGTCCTCGCTCAGCGGCTCGGTGCTCTCCTCGGTGGCCACGCTGAAGTTCTCCAGGATGATGGCGATGTACATGTTGACCACGATGAGGAAGGAAATTATGATGTAGGTGACAAAGAAGGTGATGCCCACCGAGGGGTTGCCACAGTTGCCCCGGGCATTGGTGCCTGTGTGGATGAGGTTGGGGTTGCACTCTTCCGGAGAGTTGTTGAGGATGGGGCTGAGCAGGCCGTCCCAGCCTGCCGACGTGGTGATTTGGAACAGACAGATCATACTGTTGCCGAATGTCTCGAAGTTGAACATGTCGTCGATCCCTGCCTGCTTCTTGACATAGGCAAAGTTGGCCATGCCAAAGATGGCATATATAAACATTACCAGGAAGAGCAGGAGGCCGATGTTGAACAGGGCGGGAAGGGACATCATTAAGGCAAAGAGTAAGGTCCTTATTCCTTTGGCTCCGCGGATGAGTCGCAGTACTCGTCCAATCCTGGCTAATCGAATGACTCTGAAAAGAGTGGGCGATACAAAGTACTTCTCTATGATGTCAGCGAGA
>TU1445799
atataatgacagaagagaagctgcatgtatctaattatggacaagttgactaacaaataccATAccaaaatgtcaggaattatcagcagaaacatatctaaatcaggCAAAAAAAATCCTGTACCCCCGTAAAGAAATCGTTCTGCCATCCCTGGCTGTAGCTTACAGTGCATTTtctatattagggttagggtcgagtgcaggcctcagattttcactatCACATGAAGTCGGGCAGTTgcagatgggttattagcaattgtgggtgcgggtgaacaaacagctgacccgcgcACCACCACCACATACATGACTCTGAAATCAAAAGAATAATCAGTGATATTGTAGGCTTTCTCATTTATTTCACAGGAGGTTGTTATCTTAAATACAGAGGCATGTGTTTGCAACATACTAAAAAAAAAACGTCAACTGAAAGTAGTAAAACTTCTTTCTGAATAATATTTACTGCAACGGGGGCTTCACTGAGGCACTGCATTGTGGTTGAGCAGTGAGAAATGCTCTGGGAATAATCATTCTAACAACAAAACGATTATATACGGACTGCTGAGAAGATGACTGTTGTAGGTTATTGCATTTCTGACAGTTTATAAGAATGAAAAATAAGCATTTTCTGTGCATGTCTTGGATGTTTTTATGATGAAGCAGCTCTCGTTAGGATGAAAACAGTGCATTTATGACAGAGATGTGCAGAGTTGACTTTTCACCATGACATTTTTGTATAAAAATGTCCCACCCAAAAACGAATAGGATCGCTCCCGACTTTTAAACATGTTCCCCAACATTCCCAATACAAAGCATGCAATCAGAAATGTCTTTAGAAAAGTCCCCGTAGACACTGGTAAATAGCAGTGCGATCCCAGTCACACACCCATGGCATCTAATGGGAGAACGATGTGAGTAGAGGTCCATTTAGAAACAGGACAGGGGTATATACCAGGCACACACTGGATCTATTGCTACAGAAAACAGCCCTTCAACACACCTGCAACCATAACCTGAAAATATATATCATATTAAAGTTGAGCGGTgtccttattattatttgagtCAAATAGAAACCAGTGTCAGTGATATAGTTGAGAGTAGGCCTAAGCTATGGGTAACCAAGAGAAGCTGAACGGTTTGTAAAATTAATGCTGTACAAACTTTGACCCTTTTATCCTAAAAAGTAGTAAATTATTGCTAAACACAGTTTGTGCAAAATAGATAAATAATTGTTTTTCAGTCTTGAGCGCAACGTCTCTATATGATGCAGTCAAAACATGCGAAACAcactttaaataaaaaataaataggaCGATTATCCGTCCGACTAATAGTGAATATAATCGCTGAtggtcatataaaatatatagcCATTGGGGCAGTTTTAATCCTACAGAAGTTATGGAGAAAGAGAAATCTGTCAATCGTAACCATGAGATAGATGTAGGTTTGATTGTCACATACAGATCATGGTTACTGCACTGCTTCTTAGTTTTGTGTAACTAGGCCCAGATTGTTATGAAAGGGAAACAACTCAAATGCAGGGCCCCGGGATATCCCGGGATATCTTTACGTGTAAACGTAAATGCAAAAATGCTCAAAATATGCTCAAATACAATGTGGTAGTACTGCAATTCAGAAGAGGCCATGTTTTTTTTCTTACtctaaaaatataaaacattttaattattGTACTGCTATGAAAGACTGGTAACATCAACAATGTTATACTTTACTACGAAAAATTGTATCCCTTAGTTTTTTTCTCACATCTCACAGTTTGAAAACTAATTATTATAAGTAATTACACCAATAATAGTAAGACCTTTAATGAACTCATAAGGTCAGGCATACTTTGTAAATATTGATAAACTGTATTTCCTTCAGTCtaataaattattattacatCAGTGATATAATTGTTGTGACCCTGCAAAGGTCATTCATGCATATTAACTGTGAAGCAAAGTTGACATGAGCAGGATCAAAGGTTATCTAGGATTACACACACCGCCTTTGTGTACTCCCTCAAAGCATGTTctccaaaaataaataaatagttagCCTTTTCTCTATGAAAACCCCTGCAGATTCTCTGGACAACCACAAGTATTAAACCAGTGTCATTTGAGCTATGTTACATTCggtaaacaacaaaaaaagaaaaaaaagcatTTCCTAGTTGCCATTACAGAAATGTCTCGCGGTCTGGTACTCTGTCGGGTGCGGGGCAATGTTCCCTCAAGTCACTGTTCCTGGACTGTTCGGAAATTAAAACTTGGAAAAGTTCACTAGTCGCCCGTGTGACGCTGTCGTAAGAcggtggagaggaggtggaggacagGGTCTCCATCAGCTCCATCTCAGGCCCCCCGTAGTGCTCCTTGATCATGGAGGCTATGAGACCCTCTTTCTCTGGAGCGGTGCCCCCCTCGCCCGTGGGGCTCTGCGTCAGACTGATCTGCATTGATCTGTACAGGAAGGAGGCTTGCTTCATTTGCCTCCGCACCAGATGCCTGCGGTAGCACCTCTGGATAACAGCGGCCGACACATCCTCCTGCTTGCGCCTCAGCGTGGTGGTGATGGGCTCGTAGGAGATCTTGGACGGATTGGCCATCATGAATTTCTCCTCCATCTGCTGTTTGAGAGCATCCATCTCGCCCGACTCGCCCAGCACGCGCTTGGTGAAGGCAAACAGAATGTCCAGGCAGTGGATCTTATCACCGCTCACCATGGGCAGGTCCATGGAGATCAGCTTGATCTTGTTGGGCTTGCCGATGCGCAGCGGCTCCGACAGCGTGTCTGCAAAGTCTGACAGCTTGGCGTACTCGATGAACTGCGTGGCTTCCGGGTCAAACTTCTCCCACACCTCGTAGAACATCTCGAAGTCGTCCTCGCTCAGCGGCTCGGTGCTCTCCTCGGTGGCCACGCTGAAGTTCTCCAGGATGATGGCGATGTACATGTTGACCACGATGAGGAAGGAAATTATGATGTAGGTGACAAAGAAGGTGATGCCCACCGAGGGGTTGCCACAGTTGCCCCGGGCATTGGTGCCTGTGTGGATGAGGTTGGGGTTGCACTCTTCCGGAGAGTTGTTGAGGATGGGGCTGAGCAGGCCGTCCCAGCCTGCCGACGTGGTGATTTGGAACAGACAGATCATACTGTTGCCGAATGTCTCGAAGTTGAACATGTCGTCGATCCCTGCCTGCTTCTTGACATAGGCAAAGTTGGCCATGCCAAAGATGGCATATATAAACATTACCAGGAAGAGCAGGAGGCCGATGTTGAACAGGGCGGGAAGGGACATCATTAAGGCAAAGAGTAAGGTCCTTATTCCTTTGGCTCCGCGGATGAGTCGCAGTACTCGTCCAATCCTGGCTAATCGAATGACTCTGAAAAGAGTGGGCGATACAAAGTACTTCTCTATGATGTCAGCGAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1445798 False 3625 TUCP 0.43 1 18576539 18580163
TU1445796 False 3074 TUCP 0.43 1 18576718 18579791
TU1445799 True 3446 TUCP 0.43 1 18576718 18580163

Neighbor

gene id symbol gene type direction distance location
LOC110489732 wdr48 coding downstream 192433 18373431 ~ 18384106 (-)
unm_hu7910 LOC106590366 coding downstream 207305 18325310 ~ 18369234 (-)
LOC110489729 LOC106590364 coding downstream 275252 18292027 ~ 18301287 (-)
LOC110489728 NA coding downstream 284620 18275476 ~ 18291919 (-)
LOC110489726 LOC106590361 coding downstream 368039 18196075 ~ 18208500 (-)
LOC110489734 exog coding upstream 12833 18592996 ~ 18607504 (-)
actriib actriib coding upstream 38507 18618670 ~ 18680053 (-)
xylb xylb coding upstream 206707 18786870 ~ 18849057 (-)
crygn2 LOC106590379 coding upstream 291063 18871226 ~ 18874224 (-)
LOC110489739 LOC106590380 coding upstream 302643 18882806 ~ 18916856 (-)
G1265454 LOC106579582 non-coding downstream 1590 18574667 ~ 18574949 (-)
G1265453 NA non-coding downstream 2228 18573550 ~ 18574311 (-)
G1265452 NA non-coding downstream 4373 18571945 ~ 18572166 (-)
G1265371 NA non-coding downstream 139904 18434983 ~ 18436635 (-)
G1265310 NA non-coding downstream 295288 18280730 ~ 18281251 (-)
G1265464 NA non-coding upstream 86903 18667066 ~ 18683212 (-)
G1265547 NA non-coding upstream 155108 18735271 ~ 18735636 (-)
G1266320 NA non-coding upstream 270437 18850600 ~ 18850889 (-)
G1266325 NA non-coding upstream 279563 18859726 ~ 18860266 (-)
LOC110490935 LOC106579657 non-coding upstream 338640 18918785 ~ 19220905 (-)
G1265249 NA other downstream 392416 18183791 ~ 18184123 (-)
G1264199 LOC106590429 other downstream 1113562 17461828 ~ 17462977 (-)
G1263444 NA other downstream 1930122 16645644 ~ 16646417 (-)
G1262745 NA other downstream 2299987 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 2541417 15938237 ~ 16035283 (-)
G1266471 NA other upstream 528396 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 854855 19435018 ~ 19453770 (-)
G1267414 NA other upstream 1687803 20267966 ~ 20268488 (-)
G1267452 NA other upstream 1710187 20290350 ~ 20290673 (-)
G1268555 LOC106590243 other upstream 2378209 20958372 ~ 20960089 (-)

Expression


Co-expression Network