Gene
RNA
| Item | Value |
|---|---|
| gene id | G1265044 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 18584761 ~ 18618426 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1445352 | True | 863 | lncRNA | 0.45 | 2 | 18584761 | 18618426 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| scn5lab | LOC106590371 | coding | upstream | 4645 | 18390157 ~ 18580116 (+) |
| LOC110489731 | LOC106590368 | coding | upstream | 259468 | 18306214 ~ 18325293 (+) |
| LOC110489727 | LOC106590362 | coding | upstream | 309167 | 18227829 ~ 18275594 (+) |
| dnah5l | LOC106590358 | coding | upstream | 413400 | 18101687 ~ 18171361 (+) |
| LOC110489724 | LOC106590359 | coding | upstream | 492630 | 17989845 ~ 18092131 (+) |
| LOC110489736 | LOC106590352 | coding | downstream | 232205 | 18850631 ~ 18855321 (+) |
| LOC110489737 | LOC106590377 | coding | downstream | 241271 | 18859697 ~ 18866106 (+) |
| lama1 | LOC106590346 | coding | downstream | 636214 | 19254640 ~ 19322131 (+) |
| LOC118938968 | NA | coding | downstream | 674204 | 19292630 ~ 19292772 (+) |
| LOC110489742 | LOC106590345 | coding | downstream | 784341 | 19402767 ~ 19546571 (+) |
| G1265070 | NA | non-coding | upstream | 147878 | 18433629 ~ 18436883 (+) |
| G1265027 | NA | non-coding | upstream | 162098 | 18369772 ~ 18422663 (+) |
| G1264985 | NA | non-coding | upstream | 305110 | 18278750 ~ 18279651 (+) |
| G1264977 | NA | non-coding | upstream | 366218 | 18218336 ~ 18218543 (+) |
| G1265545 | NA | non-coding | downstream | 116891 | 18735317 ~ 18735521 (+) |
| G1265546 | NA | non-coding | downstream | 117153 | 18735579 ~ 18735812 (+) |
| G1265559 | NA | non-coding | downstream | 124439 | 18742865 ~ 18743142 (+) |
| G1265588 | NA | non-coding | downstream | 159627 | 18778053 ~ 18778268 (+) |
| G1265593 | NA | non-coding | downstream | 167525 | 18785951 ~ 18786165 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 2690597 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 2848344 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 2878222 | 15696896 ~ 15706601 (+) |
| LOC110489660 | pan3 | other | upstream | 3389816 | 15166247 ~ 15194945 (+) |
| G1260946 | LOC106590444 | other | upstream | 3562708 | 15020992 ~ 15022053 (+) |
| epb41l3a | LOC106590342 | other | downstream | 1055687 | 19598284 ~ 19680110 (+) |
| G1267949 | pck2 | other | downstream | 2221869 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 3167795 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 4514433 | 23132828 ~ 23146739 (+) |
