Gene
RNA
| Item | Value |
|---|---|
| gene id | G1265559 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 18742865 ~ 18743142 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1445904 | True | 278 | lncRNA | 0.39 | 1 | 18742865 | 18743142 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| scn5lab | LOC106590371 | coding | upstream | 162749 | 18390157 ~ 18580116 (+) |
| LOC110489731 | LOC106590368 | coding | upstream | 417572 | 18306214 ~ 18325293 (+) |
| LOC110489727 | LOC106590362 | coding | upstream | 467271 | 18227829 ~ 18275594 (+) |
| dnah5l | LOC106590358 | coding | upstream | 571504 | 18101687 ~ 18171361 (+) |
| LOC110489724 | LOC106590359 | coding | upstream | 650734 | 17989845 ~ 18092131 (+) |
| LOC110489736 | LOC106590352 | coding | downstream | 107489 | 18850631 ~ 18855321 (+) |
| LOC110489737 | LOC106590377 | coding | downstream | 116555 | 18859697 ~ 18866106 (+) |
| lama1 | LOC106590346 | coding | downstream | 511498 | 19254640 ~ 19322131 (+) |
| LOC118938968 | NA | coding | downstream | 549488 | 19292630 ~ 19292772 (+) |
| LOC110489742 | LOC106590345 | coding | downstream | 659625 | 19402767 ~ 19546571 (+) |
| G1265546 | NA | non-coding | upstream | 7053 | 18735579 ~ 18735812 (+) |
| G1265545 | NA | non-coding | upstream | 7344 | 18735317 ~ 18735521 (+) |
| G1265044 | NA | non-coding | upstream | 124439 | 18584761 ~ 18618426 (+) |
| G1265070 | NA | non-coding | upstream | 305982 | 18433629 ~ 18436883 (+) |
| G1265588 | NA | non-coding | downstream | 34911 | 18778053 ~ 18778268 (+) |
| G1265593 | NA | non-coding | downstream | 42809 | 18785951 ~ 18786165 (+) |
| G1265635 | xylb | non-coding | downstream | 88783 | 18831925 ~ 18836286 (+) |
| G1265677 | NA | non-coding | downstream | 175708 | 18918850 ~ 18919369 (+) |
| G1265685 | LOC106590348 | non-coding | downstream | 200943 | 18944085 ~ 18958062 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 2848701 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 3006448 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 3036326 | 15696896 ~ 15706601 (+) |
| LOC110489660 | pan3 | other | upstream | 3547920 | 15166247 ~ 15194945 (+) |
| G1260946 | LOC106590444 | other | upstream | 3720812 | 15020992 ~ 15022053 (+) |
| epb41l3a | LOC106590342 | other | downstream | 930971 | 19598284 ~ 19680110 (+) |
| G1267949 | pck2 | other | downstream | 2097153 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 3043079 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 4389717 | 23132828 ~ 23146739 (+) |
