G1266552



Basic Information


Item Value
gene id G1266552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 19365612 ~ 19426849 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1447061
TAAgagacaaatggtgatcctaactgacctaagacagggaatttttactaggattaaatgtcaggaattgtgaaacaccttagccaaatacatttaaactctgtttatgtaaacttccaacttcaactgtatgtcctaTACTTCAACAAACGTGTCAGTTGTCGATGGTAGCTTTTCTGTAAAACACTTCCCATTTCAATGTAGGGAAATTCCACGGTGACAGAGTGATGTTGAGATGAACttctttcactttaaaatgtatgccaaacaaaatctTTGATTGCTAAGTTTAACAAACTATACACCGATATGCAGAAGCCTACTTTTAACAATTGCCACATCATTTGACTAAAACACACTTGAGGAACAGTGCAGATGCTAAGTTTAGTAACAGAATGACAGTCAAATCTCCCTTAGTTTGTGaccatgttttaaaaaataatgttaaatat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1447061 True 452 lncRNA 0.34 2 19365612 19426849

Neighbor


gene id symbol gene type direction distance location
LOC110490936 lrrc30 coding downstream 127936 19236100 ~ 19237676 (-)
LOC110490935 LOC106579657 coding downstream 144707 18918785 ~ 19220905 (-)
LOC110489739 LOC106590380 coding downstream 448756 18882806 ~ 18916856 (-)
crygn2 LOC106590379 coding downstream 491388 18871226 ~ 18874224 (-)
xylb xylb coding downstream 516555 18786870 ~ 18849057 (-)
LOC110489747 LOC106590340 coding upstream 287459 19714308 ~ 19718519 (-)
LOC110489749 tws1a coding upstream 333777 19759819 ~ 19768382 (-)
LOC110490939 LOC106590335 coding upstream 346602 19773451 ~ 19933165 (-)
impa2 impa2 coding upstream 518158 19945007 ~ 19950792 (-)
gnal LOC106590334 coding upstream 537590 19964439 ~ 20031093 (-)
G1266424 NA non-coding downstream 281754 19016229 ~ 19083858 (-)
G1266457 NA non-coding downstream 286797 19078156 ~ 19078815 (-)
G1266411 NA non-coding downstream 367064 18996974 ~ 18998548 (-)
G1266384 NA non-coding downstream 405850 18958224 ~ 18959762 (-)
G1266819 NA non-coding upstream 166042 19592891 ~ 19593178 (-)
G1266880 LOC106590342 non-coding upstream 233025 19659874 ~ 19662581 (-)
G1266910 LOC106590339 non-coding upstream 282113 19708962 ~ 19709962 (-)
G1266897 LOC106590339 non-coding upstream 285861 19712710 ~ 19713025 (-)
G1266471 NA other downstream 256255 19108559 ~ 19109357 (-)
G1265456 LOC106590371 other downstream 785449 18576539 ~ 18580163 (-)
G1265249 NA other downstream 1181489 18183791 ~ 18184123 (-)
G1264199 LOC106590429 other downstream 1902635 17461828 ~ 17462977 (-)
G1263444 NA other downstream 2719195 16645644 ~ 16646417 (-)
G1266708 LOC106590345 other upstream 8169 19435018 ~ 19453770 (-)
G1267414 NA other upstream 841117 20267966 ~ 20268488 (-)
G1267452 NA other upstream 863501 20290350 ~ 20290673 (-)
G1268555 LOC106590243 other upstream 1531523 20958372 ~ 20960089 (-)
G1269265 NA other upstream 2375838 21802687 ~ 21803352 (-)

Expression



Co-expression Network