G1266708 (LOC106590345)


Basic Information

Item Value
gene id G1266708
gene name LOC106590345
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 19435018 ~ 19453770 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1447224
CTTTATGGGAAAGAACCGTTTTGAAACAGAAGTTTCTGAATGAGAAAGACAGGTCTGGGAAAGAGACAAACTAATGTCAAACTGAGAAAAACATGACTTGTGTCATTATTGTGAAAAGGAACTGAACCACAACAGTTATTAAACTGCCTTCAATTACAATTGTTCGTAGTTATTTTTAGACAATAAAAGGAATCATTATGAAACACTAAATCAGCCATTAGATTGCAGCAGAGGCTGGGAATAACAATGGTGCTGTGCAACAtacacacagttggctgatacaAGGCTAGCCTGCTGTTCCATGCCTATTGCTTACCATACAGAAAGCCTGGCTTGGAACCGCCGTGGAACCGTTGTCTTGTAAGTACTCCTCCCACAGGAAATGTTCTGGATTGGGGTGTCCCTGAGGTGCAGTGAGAGGTCTTCCGTGGTCCTGGCACCAGCCCACTGGGTGGATGTGAGGGCTGCTGGCGTCACACCAGTAGTCGTAGGTGTCGTCCCAGTTGTCAAAGTGAACCAGGAAGTGATTGTCCACGATGTCGGCCACCGAGGCCACACATACCAGGCATGGATTCTTTCTGTCCACTGCCTCCAGTTTCATGCCCACCTGAAACTTAGAGGTGCTCGTAGTACCATTTTGGGATTTAAACAGATTCTTTGGTGCAGCTTCAGCATTGCAAGCCTCTTGGTATTTCTCCCAGTTAAACTCGCTTTCATTGTAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1447224 True 722 TUCP 0.46 4 19435018 19453770

Neighbor

gene id symbol gene type direction distance location
LOC110489741 LOC106590347 coding downstream 62613 19322025 ~ 19372405 (-)
LOC110490936 lrrc30 coding downstream 197342 19236100 ~ 19237676 (-)
LOC110490935 LOC106579657 coding downstream 214113 18918785 ~ 19220905 (-)
LOC110489739 LOC106590380 coding downstream 518162 18882806 ~ 18916856 (-)
crygn2 LOC106590379 coding downstream 560794 18871226 ~ 18874224 (-)
LOC110489747 LOC106590340 coding upstream 260538 19714308 ~ 19718519 (-)
LOC110489749 tws1a coding upstream 306856 19759819 ~ 19768382 (-)
LOC110490939 LOC106590335 coding upstream 319681 19773451 ~ 19933165 (-)
impa2 impa2 coding upstream 491237 19945007 ~ 19950792 (-)
gnal LOC106590334 coding upstream 510669 19964439 ~ 20031093 (-)
G1266686 NA non-coding downstream 7278 19410848 ~ 19427740 (-)
G1266552 NA non-coding downstream 8169 19365612 ~ 19426849 (-)
G1266424 NA non-coding downstream 351160 19016229 ~ 19083858 (-)
G1266457 NA non-coding downstream 356203 19078156 ~ 19078815 (-)
G1266411 NA non-coding downstream 436470 18996974 ~ 18998548 (-)
G1266819 NA non-coding upstream 139121 19592891 ~ 19593178 (-)
G1266880 LOC106590342 non-coding upstream 206104 19659874 ~ 19662581 (-)
G1266910 LOC106590339 non-coding upstream 255192 19708962 ~ 19709962 (-)
G1266897 LOC106590339 non-coding upstream 258940 19712710 ~ 19713025 (-)
G1266471 NA other downstream 325661 19108559 ~ 19109357 (-)
G1265456 LOC106590371 other downstream 854855 18576539 ~ 18580163 (-)
G1265249 NA other downstream 1250895 18183791 ~ 18184123 (-)
G1264199 LOC106590429 other downstream 1972041 17461828 ~ 17462977 (-)
G1263444 NA other downstream 2788601 16645644 ~ 16646417 (-)
G1267414 NA other upstream 814196 20267966 ~ 20268488 (-)
G1267452 NA other upstream 836580 20290350 ~ 20290673 (-)
G1268555 LOC106590243 other upstream 1504602 20958372 ~ 20960089 (-)
G1269265 NA other upstream 2348917 21802687 ~ 21803352 (-)
G1271421 NA other upstream 4259585 23713355 ~ 23728939 (-)

Expression


Co-expression Network