G1266041


Basic Information

Item Value
gene id G1266041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 19492797 ~ 19493656 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1446429
cacacacacacacagtgggacaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctaaaatcacattgtaggattttttatgaatttatttgcaaattatggtggatatcgacataacctgaaaggctgctcagcaaggaagagaacccgatggtcactctgacagcattctagagttcctctgtggagatgggataaccttccagaaggacaaccatctcggcagtactccaccaatcagccttTATGATAGTGGCCaaccggaagccactcctcaggaaaaggcacatgacagcccgcttggagtttgcctaaagactctcagaccatgagaaacaagattatctggcctgatgaaaccaaggttgaactcttagtctggatcgagggaaagatgaacagagagaagtacagagacatccttgatgtgaaagcctgctccagaacctcagactagggtgaaggttcaccttccaacaggacaacaaccctaagcacacagccaagacaatgcaggagtggcttcaggacaagtctctgaatgtccttgagtggcccagccagagcccatacttgaacccgatcgaacatccctggagagacctgaaaatagctgtgcagcgatgctccccatccaacctgacagagcttgagatgatctgcagagaagaatgggagaaactccccaaatacaagtgtgccaagcttgtagcgtcatacccaagaagagtccatatttatatacattttttttatataacctttatttaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1446429 True 801 lncRNA 0.46 2 19492797 19493656

Neighbor

gene id symbol gene type direction distance location
lama1 LOC106590346 coding upstream 170666 19254640 ~ 19322131 (+)
LOC118938968 NA coding upstream 200025 19292630 ~ 19292772 (+)
LOC110489737 LOC106590377 coding upstream 626691 18859697 ~ 18866106 (+)
LOC110489736 LOC106590352 coding upstream 637476 18850631 ~ 18855321 (+)
scn5lab LOC106590371 coding upstream 912681 18390157 ~ 18580116 (+)
LOC110489743 LOC106590344 coding downstream 65397 19559053 ~ 19569524 (+)
epb41l3a LOC106590342 coding downstream 104628 19598284 ~ 19680110 (+)
zbtb14 LOC106590341 coding downstream 191241 19684897 ~ 19692622 (+)
LOC110490938 NA coding downstream 201515 19695171 ~ 19701742 (+)
LOC110489746 LOC106590339 coding downstream 215213 19708869 ~ 19714844 (+)
G1265889 NA non-coding upstream 196385 19295932 ~ 19296412 (+)
G1265750 NA non-coding upstream 356791 19048104 ~ 19136006 (+)
G1265790 NA non-coding upstream 380136 19111565 ~ 19112661 (+)
G1265685 LOC106590348 non-coding upstream 534735 18944085 ~ 18958062 (+)
G1265677 NA non-coding upstream 573428 18918850 ~ 18919369 (+)
G1266153 NA non-coding downstream 261520 19755176 ~ 19755845 (+)
G1266151 NA non-coding downstream 266482 19760138 ~ 19762431 (+)
G1266156 NA non-coding downstream 273651 19767307 ~ 19768614 (+)
G1266159 NA non-coding downstream 280499 19774155 ~ 19774960 (+)
G1266161 NA non-coding downstream 283815 19777471 ~ 19777680 (+)
mcmdc2 mcmdc2 other upstream 3598633 15885437 ~ 15895996 (+)
G1261980 NA other upstream 3756380 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 3786258 15696896 ~ 15706601 (+)
LOC110489660 pan3 other upstream 4297852 15166247 ~ 15194945 (+)
G1267949 pck2 other downstream 1346639 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 2292565 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 3639203 23132828 ~ 23146739 (+)
G1270643 NA other downstream 3883652 23377308 ~ 23377560 (+)

Expression


Co-expression Network