Gene
RNA
| Item | Value |
|---|---|
| gene id | G1266897 |
| gene name | LOC106590339 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 19712710 ~ 19713025 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein APCDD1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1447432 | True | 316 | lncRNA | 0.58 | 1 | 19712710 | 19713025 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489741 | LOC106590347 | coding | downstream | 340305 | 19322025 ~ 19372405 (-) |
| LOC110490936 | lrrc30 | coding | downstream | 475034 | 19236100 ~ 19237676 (-) |
| LOC110490935 | LOC106579657 | coding | downstream | 491805 | 18918785 ~ 19220905 (-) |
| LOC110489739 | LOC106590380 | coding | downstream | 795854 | 18882806 ~ 18916856 (-) |
| crygn2 | LOC106590379 | coding | downstream | 838486 | 18871226 ~ 18874224 (-) |
| LOC110489747 | LOC106590340 | coding | upstream | 1283 | 19714308 ~ 19718519 (-) |
| LOC110489749 | tws1a | coding | upstream | 47601 | 19759819 ~ 19768382 (-) |
| LOC110490939 | LOC106590335 | coding | upstream | 60426 | 19773451 ~ 19933165 (-) |
| impa2 | impa2 | coding | upstream | 231982 | 19945007 ~ 19950792 (-) |
| gnal | LOC106590334 | coding | upstream | 251414 | 19964439 ~ 20031093 (-) |
| G1266910 | LOC106590339 | non-coding | downstream | 2748 | 19708962 ~ 19709962 (-) |
| G1266880 | LOC106590342 | non-coding | downstream | 50129 | 19659874 ~ 19662581 (-) |
| G1266819 | NA | non-coding | downstream | 119532 | 19592891 ~ 19593178 (-) |
| G1266686 | NA | non-coding | downstream | 284970 | 19410848 ~ 19427740 (-) |
| G1266552 | NA | non-coding | downstream | 285861 | 19365612 ~ 19426849 (-) |
| G1266943 | NA | non-coding | upstream | 72018 | 19785043 ~ 19785261 (-) |
| G1266949 | NA | non-coding | upstream | 80892 | 19793917 ~ 19802097 (-) |
| G1266958 | NA | non-coding | upstream | 95707 | 19808732 ~ 19809123 (-) |
| G1266961 | NA | non-coding | upstream | 102349 | 19815374 ~ 19815682 (-) |
| G1266708 | LOC106590345 | other | downstream | 258940 | 19435018 ~ 19453770 (-) |
| G1266471 | NA | other | downstream | 603353 | 19108559 ~ 19109357 (-) |
| G1265456 | LOC106590371 | other | downstream | 1132547 | 18576539 ~ 18580163 (-) |
| G1265249 | NA | other | downstream | 1528587 | 18183791 ~ 18184123 (-) |
| G1264199 | LOC106590429 | other | downstream | 2249733 | 17461828 ~ 17462977 (-) |
| G1267414 | NA | other | upstream | 554941 | 20267966 ~ 20268488 (-) |
| G1267452 | NA | other | upstream | 577325 | 20290350 ~ 20290673 (-) |
| G1268555 | LOC106590243 | other | upstream | 1245347 | 20958372 ~ 20960089 (-) |
| G1269265 | NA | other | upstream | 2089662 | 21802687 ~ 21803352 (-) |
| G1271421 | NA | other | upstream | 4000330 | 23713355 ~ 23728939 (-) |
