G1266153


Basic Information

Item Value
gene id G1266153
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 19755176 ~ 19755845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1446608
TGAATGCCATGCAGGAGAAGGATCCCGACATACTAacaagaaggtggactttgttgcGTTTTATAGCCCAAGTGATAAATTGCACTATTCAAACGAATAAAACATCTAAGGTAGACATCATTGTGAAGGCAGCAAATAGATTTCTGGATCTCCAGGACTTTACAGCCGAAATGTTATGGGGAGTACTGAATATGAGTTTACACCTCCCAGGTTCCTGAGTCTGTGTGAAGGGATCTGAATAGTAcagtttgtgtttgaaattcagggTAGTGAATTTGGTTCATGTTTATTTTTTGGTAATTCGTACAATTTGTTCATTTTTTTACTACCCCATACAGTAGGTGGCTCCTGTAATAcctgcatgtttcaagcagaccaccatagtccctgtggccAAGAAAGCGAagaacctgcttaaatgactaccgccccgtagcactcacgttggtagccatgaagttctttgaaaggctggtcatggctcacatcaacaccatcatcccggaaaccctagaatCACTCCAACTCGCATactaccccaacagatccacagctgacgcaatctcaatcgcactccacactgctctttctcacatgtacaaaaggaacacctatgtgagaaagctattaattgactacagctcagcgttcaacaccatagtgcccacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1446608 True 670 lncRNA 0.43 1 19755176 19755845

Neighbor

gene id symbol gene type direction distance location
LOC110489748 LOC106590337 coding upstream 5070 19726580 ~ 19750106 (+)
LOC110489746 LOC106590339 coding upstream 40332 19708869 ~ 19714844 (+)
LOC110490938 NA coding upstream 53434 19695171 ~ 19701742 (+)
zbtb14 LOC106590341 coding upstream 62554 19684897 ~ 19692622 (+)
epb41l3a LOC106590342 coding upstream 75066 19598284 ~ 19680110 (+)
LOC110489750 LOC106590336 coding downstream 13108 19768953 ~ 19773398 (+)
LOC110490828 LOC101268971 coding downstream 296784 20052629 ~ 20055980 (+)
gcm2 LOC106590332 coding downstream 332931 20088776 ~ 20093865 (+)
mak mak coding downstream 376912 20132757 ~ 20146308 (+)
tfap2a tfap2a coding downstream 396512 20152357 ~ 20165444 (+)
G1266041 NA non-coding upstream 261520 19492797 ~ 19493656 (+)
G1265889 NA non-coding upstream 458764 19295932 ~ 19296412 (+)
G1265750 NA non-coding upstream 619170 19048104 ~ 19136006 (+)
G1265790 NA non-coding upstream 642515 19111565 ~ 19112661 (+)
G1265685 LOC106590348 non-coding upstream 797114 18944085 ~ 18958062 (+)
G1266151 NA non-coding downstream 4293 19760138 ~ 19762431 (+)
G1266156 NA non-coding downstream 11462 19767307 ~ 19768614 (+)
G1266159 NA non-coding downstream 18310 19774155 ~ 19774960 (+)
G1266161 NA non-coding downstream 21626 19777471 ~ 19777680 (+)
G1266158 LOC106590335 non-coding downstream 22855 19778700 ~ 19778951 (+)
LOC110489737 LOC106590377 other upstream 892665 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 3861012 15885437 ~ 15895996 (+)
G1261980 NA other upstream 4018759 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 4048637 15696896 ~ 15706601 (+)
G1267949 pck2 other downstream 1084450 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 2030376 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 3377014 23132828 ~ 23146739 (+)
G1270643 NA other downstream 3621463 23377308 ~ 23377560 (+)
G1270652 NA other downstream 3650815 23406660 ~ 23408002 (+)

Expression


Co-expression Network