G1266151


Basic Information

Item Value
gene id G1266151
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 19760138 ~ 19762431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1446606
tttctctcactaggtcaggatatgtAAGCCgccatatatccactagttcaGATATATGCATAATATTCGTAATTTCTTTAAGagcatgagggtgatagtttgtagtgtgatttcctttacggtccattgaggtacttaaaaCCGTATTATAATCTCCCACAATAATAATTGCGTCATGTATTGCCTGTAAAGTCAAGTTATATAGcaacatcattatttggaccaTATATGGTTAATGAGACAAATCTGTTTTAGGTCCCCCAGTCATTTTGTCCATACAACTTTGTCTAAAAGTGTAGAATGAGTTTCCTGCAAAgaatagatattatattccttccTTCTTTTAGCCAGATAAAGACGGATCGTCTTGTTACTATCTGCAACACCATTACATACAATTTTAActagctatacttatttcaccacttaccatgTTTGTAAACTTACCATTAAGAAGTACCATGGTAATTGAGTGTCCATATAAACTGTACCATAATATTTGCACTGTTAAGCATATCGTAGCTGCGACTAAGGAAACCTCTAATTGTCCTTcaatattccacccccatcccaTGTAGGGTTGTCATTCCAGTGAATGTCTGACCAACCCTTTACACATGGATCCTAGGGCCTTTCAAGAGATATGGGCTCATCCTTTAAAAAGAGCACATGGTGccacctacagtacagaaccaGATCCGCAGCGAACATCATTTCGAACCCCTTCCCCTCAGTTGTACTGCATATTTCAAAAAACATGCATATCCTAATTTATTCCCACAATTGACAAATAATATGCATAATAATAAGCACTTCTAATGATTGCTACCCATAATGGCCGGTAGTAGGAATTCTACATTTTGGTCAACTGATGTGGGATGcatgcccctctctccctttccacccATAGTTCGACCTACCCCCACACCCAACTCAAATGTTCAACAGTTGTTCCATCCCTGAGCCCAACTCAAGAGAAAACTTGATGTGTGAATGCGTATACAGTTTGGCTGTTTAAGAAGGCATGCCAAATTAAGCCAGAATGGGAAGATTTGATTAACCAATATCTAGTGTTGGCTGATGAAGCTCGGATACCCCCAACACCCCCACATGCTGGTCCCCGGTTGTGAACTTATCTGTCTGACCGGCCTACCAAACTTATCTGGCTGCACTCGTCTCATCTGTCCAGCGAGCTGACCTTAACCCATCTGGCCAATTGTCCGAACTTGTTATATATCCCATCTGTCTTGATGACTTGTCCTATCGGGCCAGCCAGCTGAATTAGGATAAATTTGGCCAGATTAAACTATCTAGCCGGCCAAACTTATTTCTGAAATTATCATATCTGGCCAAACTTGTCCTAACTTTTCCAGGCCTGGAAAACACAAAATTCCATCACCGTACAAACCGTGCTTATCCTATCTGGTCAGCCAAACATGTCCCATCTGTCTGGCCAGCTGAACTTAACCCATCTGTACCAAACATGTCCCGTCCCATCTGTCTGGCCAGCTGAACTTAACCCATCTGTACCAAACATGTCCCATCTGTCTGGCCAGCTGAACTTAACCCATCTGTACCAAACATGTCCTATATGTCTGGCCGAACTCATTTTCAATTATTCgatttaaaataatgtttacagTATGAAACAAATCATTTAAACTGCACATATAAAATCAAACATGTGAACGGCTGGCTATTAGTTTGATTGAATATGGACGTTGTTTCCTAAAATAACACGTGATCAAACAATTATACAAATAGCATTTACTCTGATTTTCCATGACACCAAAAATAAAATGCCATTGCATTACACATTTTAAAACATTGACCTCTCCTCTTAACTAGAAAAAAATTCAAAACGATATATTTCTAATTTGCTAAAGAACCTATAAAATATAAAAATGAGCAAAAATAATTCATAATACATAAAAATAGTGAAGCATTATGAAAGTCATATTCCTCAGTTAACCTTCACCTGCTACTCCAGATAGTCCCCTAATGTCGCCAGTCCTATTAGCTTCAATCAGAACAGGCAGTTCATACACTTGACAGTTTTGCTGCCGTAGTCGAGGCACTCTGGGCCGATACACTCACAGCAGGCATTGTGGAACCAGCGGTATTTGGAGCCCCCCATGGACTCACAGTATTGCTTGCACTGGCGGATGGACACGCAGTCGTCAAAGTACACCACAGTGCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1446606 True 2201 lncRNA 0.40 3 19760138 19762431

Neighbor

gene id symbol gene type direction distance location
LOC110489748 LOC106590337 coding upstream 10032 19726580 ~ 19750106 (+)
LOC110489746 LOC106590339 coding upstream 45294 19708869 ~ 19714844 (+)
LOC110490938 NA coding upstream 58396 19695171 ~ 19701742 (+)
zbtb14 LOC106590341 coding upstream 67516 19684897 ~ 19692622 (+)
epb41l3a LOC106590342 coding upstream 80028 19598284 ~ 19680110 (+)
LOC110489750 LOC106590336 coding downstream 6522 19768953 ~ 19773398 (+)
LOC110490828 LOC101268971 coding downstream 290198 20052629 ~ 20055980 (+)
gcm2 LOC106590332 coding downstream 326345 20088776 ~ 20093865 (+)
mak mak coding downstream 370326 20132757 ~ 20146308 (+)
tfap2a tfap2a coding downstream 389926 20152357 ~ 20165444 (+)
G1266153 NA non-coding upstream 4293 19755176 ~ 19755845 (+)
G1266041 NA non-coding upstream 266482 19492797 ~ 19493656 (+)
G1265889 NA non-coding upstream 463726 19295932 ~ 19296412 (+)
G1265750 NA non-coding upstream 624132 19048104 ~ 19136006 (+)
G1265790 NA non-coding upstream 647477 19111565 ~ 19112661 (+)
G1266156 NA non-coding downstream 4876 19767307 ~ 19768614 (+)
G1266159 NA non-coding downstream 11724 19774155 ~ 19774960 (+)
G1266161 NA non-coding downstream 15040 19777471 ~ 19777680 (+)
G1266158 LOC106590335 non-coding downstream 16269 19778700 ~ 19778951 (+)
G1266163 NA non-coding downstream 18640 19781071 ~ 19781416 (+)
LOC110489737 LOC106590377 other upstream 897627 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 3865974 15885437 ~ 15895996 (+)
G1261980 NA other upstream 4023721 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 4053599 15696896 ~ 15706601 (+)
G1267949 pck2 other downstream 1077864 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 2023790 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 3370428 23132828 ~ 23146739 (+)
G1270643 NA other downstream 3614877 23377308 ~ 23377560 (+)
G1270652 NA other downstream 3644229 23406660 ~ 23408002 (+)

Expression


Co-expression Network