Gene
RNA
| Item | Value |
|---|---|
| gene id | G1266156 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 19767307 ~ 19768614 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1446612 | True | 576 | lncRNA | 0.45 | 2 | 19767307 | 19768614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489748 | LOC106590337 | coding | upstream | 17201 | 19726580 ~ 19750106 (+) |
| LOC110489746 | LOC106590339 | coding | upstream | 52463 | 19708869 ~ 19714844 (+) |
| LOC110490938 | NA | coding | upstream | 65565 | 19695171 ~ 19701742 (+) |
| zbtb14 | LOC106590341 | coding | upstream | 74685 | 19684897 ~ 19692622 (+) |
| epb41l3a | LOC106590342 | coding | upstream | 87197 | 19598284 ~ 19680110 (+) |
| LOC110489750 | LOC106590336 | coding | downstream | 339 | 19768953 ~ 19773398 (+) |
| LOC110490828 | LOC101268971 | coding | downstream | 284015 | 20052629 ~ 20055980 (+) |
| gcm2 | LOC106590332 | coding | downstream | 320162 | 20088776 ~ 20093865 (+) |
| mak | mak | coding | downstream | 364143 | 20132757 ~ 20146308 (+) |
| tfap2a | tfap2a | coding | downstream | 383743 | 20152357 ~ 20165444 (+) |
| G1266151 | NA | non-coding | upstream | 4876 | 19760138 ~ 19762431 (+) |
| G1266153 | NA | non-coding | upstream | 11462 | 19755176 ~ 19755845 (+) |
| G1266041 | NA | non-coding | upstream | 273651 | 19492797 ~ 19493656 (+) |
| G1265889 | NA | non-coding | upstream | 470895 | 19295932 ~ 19296412 (+) |
| G1265750 | NA | non-coding | upstream | 631301 | 19048104 ~ 19136006 (+) |
| G1266159 | NA | non-coding | downstream | 5541 | 19774155 ~ 19774960 (+) |
| G1266161 | NA | non-coding | downstream | 8857 | 19777471 ~ 19777680 (+) |
| G1266158 | LOC106590335 | non-coding | downstream | 10086 | 19778700 ~ 19778951 (+) |
| G1266163 | NA | non-coding | downstream | 12457 | 19781071 ~ 19781416 (+) |
| G1266164 | LOC106590335 | non-coding | downstream | 12871 | 19781485 ~ 19781805 (+) |
| LOC110489737 | LOC106590377 | other | upstream | 904796 | 18859697 ~ 18866106 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 3873143 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 4030890 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 4060768 | 15696896 ~ 15706601 (+) |
| G1267949 | pck2 | other | downstream | 1071681 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 2017607 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 3364245 | 23132828 ~ 23146739 (+) |
| G1270643 | NA | other | downstream | 3608694 | 23377308 ~ 23377560 (+) |
| G1270652 | NA | other | downstream | 3638046 | 23406660 ~ 23408002 (+) |
