G1266179


Basic Information

Item Value
gene id G1266179
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 19800979 ~ 19802097 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1446636
agagagacagagagagagagagagacagagagagagagacagagagacagagagacagagagagagagagacagagagagagagagacagagagacagagagagagagagacagagagacagagagagagagagacagagagagagagagagagagagagagacagagagacagagagatacagagagagagagagacagagagacagagagagagagagacagagagacagagagagagagagacagagagagagagagagagagagagagagagagacagagagacagagagacaga
>TU1446637
agagagacagagagagagagagagagagatacagagagagagagagacagagagacagagagagagagagacagagagacagagagagagagagacagagagagagagagagagagagagagacagagagacagagagatacagagagagagagagacagagagacagagagagagagagacagagagacagagagagagagagacagagagagagagagagagagagagagagagagagagagagagagagagagacagagagacagagagagagagagacagagagacagagagagagagagacagagagacagagagagagagagacagagagacagagagagagagagacagagagagagagagagagagagagagagagacagagagagagagagagagagagaga
>TU1446635
acagagagagagagagacagagagacagagagagagagagacagagagacagagagacagagagagagagacagagagacagagagagagagagacagagagacagagagacagagagacagagagagagagagacagagagacagagagagagagagacagagagacagagagagagagagacagagagagagagagagagagagagagagagacagagagagagagagagagagagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1446636 False 299 lncRNA 0.49 2 19800979 19801561
TU1446637 False 411 lncRNA 0.49 4 19800979 19802097
TU1446635 True 241 lncRNA 0.50 2 19801205 19802097

Neighbor

gene id symbol gene type direction distance location
LOC110489750 LOC106590336 coding upstream 27581 19768953 ~ 19773398 (+)
LOC110489748 LOC106590337 coding upstream 50873 19726580 ~ 19750106 (+)
LOC110489746 LOC106590339 coding upstream 86135 19708869 ~ 19714844 (+)
LOC110490938 NA coding upstream 99237 19695171 ~ 19701742 (+)
zbtb14 LOC106590341 coding upstream 108357 19684897 ~ 19692622 (+)
LOC110490828 LOC101268971 coding downstream 250532 20052629 ~ 20055980 (+)
gcm2 LOC106590332 coding downstream 286679 20088776 ~ 20093865 (+)
mak mak coding downstream 330660 20132757 ~ 20146308 (+)
tfap2a tfap2a coding downstream 350260 20152357 ~ 20165444 (+)
ofcc1 ofcc1 coding downstream 506550 20308647 ~ 20420757 (+)
G1266168 NA non-coding upstream 16219 19784472 ~ 19784760 (+)
G1266166 LOC106590335 non-coding upstream 17558 19782906 ~ 19783421 (+)
G1266165 LOC106590335 non-coding upstream 18264 19782453 ~ 19782715 (+)
G1266164 LOC106590335 non-coding upstream 19174 19781485 ~ 19781805 (+)
G1266163 NA non-coding upstream 19563 19781071 ~ 19781416 (+)
G1266183 NA non-coding downstream 2460 19804557 ~ 19804828 (+)
G1266189 LOC106590335 non-coding downstream 9518 19811615 ~ 19811955 (+)
G1266192 NA non-coding downstream 14014 19816111 ~ 19818869 (+)
G1266195 NA non-coding downstream 20904 19823001 ~ 19823649 (+)
G1266199 LOC106590335 non-coding downstream 27986 19830083 ~ 19830327 (+)
epb41l3a LOC106590342 other upstream 120874 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 938468 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 3906815 15885437 ~ 15895996 (+)
G1261980 NA other upstream 4064562 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 4094440 15696896 ~ 15706601 (+)
G1267949 pck2 other downstream 1038198 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 1984124 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 3330762 23132828 ~ 23146739 (+)
G1270643 NA other downstream 3575211 23377308 ~ 23377560 (+)
G1270652 NA other downstream 3604563 23406660 ~ 23408002 (+)

Expression


Co-expression Network