Gene
RNA
| Item | Value |
|---|---|
| gene id | G1266256 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 19924727 ~ 19924935 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1446724 | True | 209 | lncRNA | 0.47 | 1 | 19924727 | 19924935 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489750 | LOC106590336 | coding | upstream | 151329 | 19768953 ~ 19773398 (+) |
| LOC110489748 | LOC106590337 | coding | upstream | 174621 | 19726580 ~ 19750106 (+) |
| LOC110489746 | LOC106590339 | coding | upstream | 209883 | 19708869 ~ 19714844 (+) |
| LOC110490938 | NA | coding | upstream | 222985 | 19695171 ~ 19701742 (+) |
| zbtb14 | LOC106590341 | coding | upstream | 232105 | 19684897 ~ 19692622 (+) |
| LOC110490828 | LOC101268971 | coding | downstream | 127694 | 20052629 ~ 20055980 (+) |
| gcm2 | LOC106590332 | coding | downstream | 163841 | 20088776 ~ 20093865 (+) |
| mak | mak | coding | downstream | 207822 | 20132757 ~ 20146308 (+) |
| tfap2a | tfap2a | coding | downstream | 227422 | 20152357 ~ 20165444 (+) |
| ofcc1 | ofcc1 | coding | downstream | 383712 | 20308647 ~ 20420757 (+) |
| G1266249 | NA | non-coding | upstream | 5528 | 19918999 ~ 19919199 (+) |
| G1266208 | NA | non-coding | upstream | 6616 | 19840377 ~ 19918111 (+) |
| G1266207 | NA | non-coding | upstream | 86312 | 19838123 ~ 19838415 (+) |
| G1266199 | LOC106590335 | non-coding | upstream | 94400 | 19830083 ~ 19830327 (+) |
| G1266195 | NA | non-coding | upstream | 101078 | 19823001 ~ 19823649 (+) |
| G1266259 | NA | non-coding | downstream | 2053 | 19926988 ~ 19927199 (+) |
| G1266262 | NA | non-coding | downstream | 7838 | 19932773 ~ 19933103 (+) |
| G1267064 | NA | non-coding | downstream | 43467 | 19968402 ~ 19969789 (+) |
| G1267065 | NA | non-coding | downstream | 44314 | 19969249 ~ 19970859 (+) |
| G1267070 | NA | non-coding | downstream | 55030 | 19979965 ~ 19997535 (+) |
| epb41l3a | LOC106590342 | other | upstream | 244622 | 19598284 ~ 19680110 (+) |
| LOC110489737 | LOC106590377 | other | upstream | 1062216 | 18859697 ~ 18866106 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 4030563 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 4188310 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 4218188 | 15696896 ~ 15706601 (+) |
| G1267949 | pck2 | other | downstream | 915360 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 1861286 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 3207924 | 23132828 ~ 23146739 (+) |
| G1270643 | NA | other | downstream | 3452373 | 23377308 ~ 23377560 (+) |
| G1270652 | NA | other | downstream | 3481725 | 23406660 ~ 23408002 (+) |
