Gene
RNA
| Item | Value |
|---|---|
| gene id | G1267047 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 19941699 ~ 19942214 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1447595 | True | 516 | lncRNA | 0.43 | 1 | 19941699 | 19942214 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490939 | LOC106590335 | coding | downstream | 8534 | 19773451 ~ 19933165 (-) |
| LOC110489749 | tws1a | coding | downstream | 173317 | 19759819 ~ 19768382 (-) |
| LOC110489747 | LOC106590340 | coding | downstream | 223180 | 19714308 ~ 19718519 (-) |
| LOC110489741 | LOC106590347 | coding | downstream | 569294 | 19322025 ~ 19372405 (-) |
| LOC110490936 | lrrc30 | coding | downstream | 704023 | 19236100 ~ 19237676 (-) |
| impa2 | impa2 | coding | upstream | 2793 | 19945007 ~ 19950792 (-) |
| gnal | LOC106590334 | coding | upstream | 22225 | 19964439 ~ 20031093 (-) |
| sycp2l | sycp2l | coding | upstream | 120878 | 20063092 ~ 20087189 (-) |
| tmem14ca | tm14c | coding | upstream | 204069 | 20146283 ~ 20148723 (-) |
| LOC110489759 | NA | coding | upstream | 614558 | 20556772 ~ 20566859 (-) |
| G1267046 | NA | non-coding | downstream | 590 | 19940825 ~ 19941109 (-) |
| G1267035 | NA | non-coding | downstream | 12746 | 19928715 ~ 19928953 (-) |
| G1266979 | NA | non-coding | downstream | 103972 | 19837390 ~ 19837727 (-) |
| G1266972 | NA | non-coding | downstream | 109330 | 19832158 ~ 19832369 (-) |
| G1266966 | NA | non-coding | downstream | 120678 | 19820812 ~ 19821021 (-) |
| G1267208 | NA | non-coding | upstream | 8886 | 19951100 ~ 19951457 (-) |
| G1267280 | LOC106590332 | non-coding | upstream | 147605 | 20089819 ~ 20090930 (-) |
| G1267293 | NA | non-coding | upstream | 175857 | 20118071 ~ 20118297 (-) |
| G1267313 | NA | non-coding | upstream | 208279 | 20150493 ~ 20150701 (-) |
| G1267331 | NA | non-coding | upstream | 235490 | 20177704 ~ 20177947 (-) |
| G1266708 | LOC106590345 | other | downstream | 487929 | 19435018 ~ 19453770 (-) |
| G1266471 | NA | other | downstream | 832342 | 19108559 ~ 19109357 (-) |
| G1265456 | LOC106590371 | other | downstream | 1361536 | 18576539 ~ 18580163 (-) |
| G1265249 | NA | other | downstream | 1757576 | 18183791 ~ 18184123 (-) |
| G1264199 | LOC106590429 | other | downstream | 2478722 | 17461828 ~ 17462977 (-) |
| G1267414 | NA | other | upstream | 325752 | 20267966 ~ 20268488 (-) |
| G1267452 | NA | other | upstream | 348136 | 20290350 ~ 20290673 (-) |
| G1268555 | LOC106590243 | other | upstream | 1016158 | 20958372 ~ 20960089 (-) |
| G1269265 | NA | other | upstream | 1860473 | 21802687 ~ 21803352 (-) |
| G1271421 | NA | other | upstream | 3771141 | 23713355 ~ 23728939 (-) |
