Gene
RNA
| Item | Value |
|---|---|
| gene id | G1267280 |
| gene name | LOC106590332 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 20089819 ~ 20090930 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: chorion-specific transcription factor GCMb-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1447858 | True | 440 | lncRNA | 0.51 | 2 | 20089819 | 20090930 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sycp2l | sycp2l | coding | downstream | 2630 | 20063092 ~ 20087189 (-) |
| gnal | LOC106590334 | coding | downstream | 58726 | 19964439 ~ 20031093 (-) |
| impa2 | impa2 | coding | downstream | 139027 | 19945007 ~ 19950792 (-) |
| LOC110490939 | LOC106590335 | coding | downstream | 156654 | 19773451 ~ 19933165 (-) |
| LOC110489749 | tws1a | coding | downstream | 321437 | 19759819 ~ 19768382 (-) |
| tmem14ca | tm14c | coding | upstream | 55353 | 20146283 ~ 20148723 (-) |
| LOC110489759 | NA | coding | upstream | 465842 | 20556772 ~ 20566859 (-) |
| bmp6 | bmp6 | coding | upstream | 599941 | 20690871 ~ 20724923 (-) |
| zgc:101569 | LOC106590252 | coding | upstream | 638076 | 20729006 ~ 20752125 (-) |
| pdcd6 | LOC106590254 | coding | upstream | 661577 | 20752507 ~ 20760847 (-) |
| G1267208 | NA | non-coding | downstream | 138362 | 19951100 ~ 19951457 (-) |
| G1267047 | NA | non-coding | downstream | 147605 | 19941699 ~ 19942214 (-) |
| G1267046 | NA | non-coding | downstream | 148710 | 19940825 ~ 19941109 (-) |
| G1267035 | NA | non-coding | downstream | 160866 | 19928715 ~ 19928953 (-) |
| G1266979 | NA | non-coding | downstream | 252092 | 19837390 ~ 19837727 (-) |
| G1267293 | NA | non-coding | upstream | 27141 | 20118071 ~ 20118297 (-) |
| G1267313 | NA | non-coding | upstream | 59563 | 20150493 ~ 20150701 (-) |
| G1267331 | NA | non-coding | upstream | 86774 | 20177704 ~ 20177947 (-) |
| G1267352 | NA | non-coding | upstream | 118435 | 20209365 ~ 20209597 (-) |
| G1267362 | NA | non-coding | upstream | 126433 | 20217363 ~ 20217675 (-) |
| G1266708 | LOC106590345 | other | downstream | 636049 | 19435018 ~ 19453770 (-) |
| G1266471 | NA | other | downstream | 980462 | 19108559 ~ 19109357 (-) |
| G1265456 | LOC106590371 | other | downstream | 1509656 | 18576539 ~ 18580163 (-) |
| G1265249 | NA | other | downstream | 1905696 | 18183791 ~ 18184123 (-) |
| G1264199 | LOC106590429 | other | downstream | 2626842 | 17461828 ~ 17462977 (-) |
| G1267414 | NA | other | upstream | 177036 | 20267966 ~ 20268488 (-) |
| G1267452 | NA | other | upstream | 199420 | 20290350 ~ 20290673 (-) |
| G1268555 | LOC106590243 | other | upstream | 867442 | 20958372 ~ 20960089 (-) |
| G1269265 | NA | other | upstream | 1711757 | 21802687 ~ 21803352 (-) |
| G1271421 | NA | other | upstream | 3622425 | 23713355 ~ 23728939 (-) |
