G1267358


Basic Information

Item Value
gene id G1267358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 20215057 ~ 20215343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1447948
aatcacagccgtatatattcccccccaagcagacacattgatggccctgaactaactttatttgactctttgcaaactggaaaccacatattctgaggctgcattcattgtagctggggattttaacaaggctaatctgaaaacaaaactcactaaattgtatcagcatatcgattgcgcaaccagggctggtaaaaccttggatcattgctattctaacttccgcgacgcatataaggccctcccccgccctcctttcggaaaagctgaccacgactccattttgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1447948 True 287 lncRNA 0.45 1 20215057 20215343

Neighbor

gene id symbol gene type direction distance location
tfap2a tfap2a coding upstream 49613 20152357 ~ 20165444 (+)
mak mak coding upstream 68749 20132757 ~ 20146308 (+)
gcm2 LOC106590332 coding upstream 121192 20088776 ~ 20093865 (+)
LOC110490828 LOC101268971 coding upstream 159077 20052629 ~ 20055980 (+)
LOC110489750 LOC106590336 coding upstream 441659 19768953 ~ 19773398 (+)
ofcc1 ofcc1 coding downstream 93304 20308647 ~ 20420757 (+)
slc35b3 slc35b3 coding downstream 351293 20566636 ~ 20582807 (+)
eef1e1 eef1e1 coding downstream 421251 20636594 ~ 20644188 (+)
bloc1s5 bloc1s5 coding downstream 441871 20657214 ~ 20660349 (+)
txndc5 LOC106590251 coding downstream 458586 20673929 ~ 20689970 (+)
G1267204 NA non-coding upstream 28576 20186269 ~ 20186481 (+)
G1267070 NA non-coding upstream 217522 19979965 ~ 19997535 (+)
G1267065 NA non-coding upstream 244198 19969249 ~ 19970859 (+)
G1267064 NA non-coding upstream 245268 19968402 ~ 19969789 (+)
G1266262 NA non-coding upstream 281954 19932773 ~ 19933103 (+)
G1267369 NA non-coding downstream 8064 20223407 ~ 20223643 (+)
G1267391 NA non-coding downstream 32697 20248040 ~ 20248275 (+)
G1267451 NA non-coding downstream 75098 20290441 ~ 20290708 (+)
G1267465 NA non-coding downstream 88424 20303767 ~ 20304009 (+)
G1267467 NA non-coding downstream 89625 20304968 ~ 20305356 (+)
epb41l3a LOC106590342 other upstream 534952 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 1352546 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 4320893 15885437 ~ 15895996 (+)
G1261980 NA other upstream 4478640 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 4508518 15696896 ~ 15706601 (+)
G1267949 pck2 other downstream 624952 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 1570878 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 2917516 23132828 ~ 23146739 (+)
G1270643 NA other downstream 3161965 23377308 ~ 23377560 (+)
G1270652 NA other downstream 3191317 23406660 ~ 23408002 (+)

Expression


Co-expression Network