Gene
RNA
| Item | Value |
|---|---|
| gene id | G1267369 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 20223407 ~ 20223643 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1447959 | True | 237 | lncRNA | 0.49 | 1 | 20223407 | 20223643 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tfap2a | tfap2a | coding | upstream | 57963 | 20152357 ~ 20165444 (+) |
| mak | mak | coding | upstream | 77099 | 20132757 ~ 20146308 (+) |
| gcm2 | LOC106590332 | coding | upstream | 129542 | 20088776 ~ 20093865 (+) |
| LOC110490828 | LOC101268971 | coding | upstream | 167427 | 20052629 ~ 20055980 (+) |
| LOC110489750 | LOC106590336 | coding | upstream | 450009 | 19768953 ~ 19773398 (+) |
| ofcc1 | ofcc1 | coding | downstream | 85004 | 20308647 ~ 20420757 (+) |
| slc35b3 | slc35b3 | coding | downstream | 342993 | 20566636 ~ 20582807 (+) |
| eef1e1 | eef1e1 | coding | downstream | 412951 | 20636594 ~ 20644188 (+) |
| bloc1s5 | bloc1s5 | coding | downstream | 433571 | 20657214 ~ 20660349 (+) |
| txndc5 | LOC106590251 | coding | downstream | 450286 | 20673929 ~ 20689970 (+) |
| G1267358 | NA | non-coding | upstream | 8064 | 20215057 ~ 20215343 (+) |
| G1267204 | NA | non-coding | upstream | 36926 | 20186269 ~ 20186481 (+) |
| G1267070 | NA | non-coding | upstream | 225872 | 19979965 ~ 19997535 (+) |
| G1267065 | NA | non-coding | upstream | 252548 | 19969249 ~ 19970859 (+) |
| G1267064 | NA | non-coding | upstream | 253618 | 19968402 ~ 19969789 (+) |
| G1267391 | NA | non-coding | downstream | 24397 | 20248040 ~ 20248275 (+) |
| G1267451 | NA | non-coding | downstream | 66798 | 20290441 ~ 20290708 (+) |
| G1267465 | NA | non-coding | downstream | 80124 | 20303767 ~ 20304009 (+) |
| G1267467 | NA | non-coding | downstream | 81325 | 20304968 ~ 20305356 (+) |
| G1267497 | NA | non-coding | downstream | 108697 | 20332340 ~ 20332553 (+) |
| epb41l3a | LOC106590342 | other | upstream | 543302 | 19598284 ~ 19680110 (+) |
| LOC110489737 | LOC106590377 | other | upstream | 1360896 | 18859697 ~ 18866106 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 4329243 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 4486990 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 4516868 | 15696896 ~ 15706601 (+) |
| G1267949 | pck2 | other | downstream | 616652 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 1562578 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 2909216 | 23132828 ~ 23146739 (+) |
| G1270643 | NA | other | downstream | 3153665 | 23377308 ~ 23377560 (+) |
| G1270652 | NA | other | downstream | 3183017 | 23406660 ~ 23408002 (+) |
