G1267497


Basic Information

Item Value
gene id G1267497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 20332340 ~ 20332553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1448095
cattcattgtcttcttggtaagcaacttcagtgtagatttggccttgagttttagtcattgtcctgctgaaaggtggaaagcagactcaaatcaaatcaaatgtatgtatatagcccttcgtacatcaactgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1448095 True 214 lncRNA 0.42 1 20332340 20332553

Neighbor

gene id symbol gene type direction distance location
tfap2a tfap2a coding upstream 166896 20152357 ~ 20165444 (+)
mak mak coding upstream 186032 20132757 ~ 20146308 (+)
gcm2 LOC106590332 coding upstream 238475 20088776 ~ 20093865 (+)
LOC110490828 LOC101268971 coding upstream 276360 20052629 ~ 20055980 (+)
LOC110489750 LOC106590336 coding upstream 558942 19768953 ~ 19773398 (+)
slc35b3 slc35b3 coding downstream 234083 20566636 ~ 20582807 (+)
eef1e1 eef1e1 coding downstream 304041 20636594 ~ 20644188 (+)
bloc1s5 bloc1s5 coding downstream 324661 20657214 ~ 20660349 (+)
txndc5 LOC106590251 coding downstream 341376 20673929 ~ 20689970 (+)
rec8b rec8 coding downstream 418631 20751184 ~ 20775305 (+)
G1267467 NA non-coding upstream 26984 20304968 ~ 20305356 (+)
G1267465 NA non-coding upstream 28331 20303767 ~ 20304009 (+)
G1267451 NA non-coding upstream 41632 20290441 ~ 20290708 (+)
G1267391 NA non-coding upstream 84065 20248040 ~ 20248275 (+)
G1267369 NA non-coding upstream 108697 20223407 ~ 20223643 (+)
G1267514 NA non-coding downstream 11788 20344341 ~ 20344542 (+)
G1267529 NA non-coding downstream 25445 20357998 ~ 20358267 (+)
G1267543 NA non-coding downstream 35549 20368102 ~ 20368346 (+)
G1267565 NA non-coding downstream 56724 20389277 ~ 20389528 (+)
G1267573 NA non-coding downstream 72379 20404932 ~ 20405167 (+)
epb41l3a LOC106590342 other upstream 652235 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 1469829 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 4438176 15885437 ~ 15895996 (+)
G1261980 NA other upstream 4595923 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 4625801 15696896 ~ 15706601 (+)
G1267949 pck2 other downstream 507742 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 1453668 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 2800306 23132828 ~ 23146739 (+)
G1270643 NA other downstream 3044755 23377308 ~ 23377560 (+)
G1270652 NA other downstream 3074107 23406660 ~ 23408002 (+)

Expression


Co-expression Network