Gene
RNA
| Item | Value |
|---|---|
| gene id | G1267695 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 20486494 ~ 20486738 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1448296 | True | 245 | lncRNA | 0.44 | 1 | 20486494 | 20486738 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ofcc1 | ofcc1 | coding | upstream | 65737 | 20308647 ~ 20420757 (+) |
| tfap2a | tfap2a | coding | upstream | 321050 | 20152357 ~ 20165444 (+) |
| mak | mak | coding | upstream | 340186 | 20132757 ~ 20146308 (+) |
| gcm2 | LOC106590332 | coding | upstream | 392629 | 20088776 ~ 20093865 (+) |
| LOC110490828 | LOC101268971 | coding | upstream | 430514 | 20052629 ~ 20055980 (+) |
| slc35b3 | slc35b3 | coding | downstream | 79898 | 20566636 ~ 20582807 (+) |
| eef1e1 | eef1e1 | coding | downstream | 149856 | 20636594 ~ 20644188 (+) |
| bloc1s5 | bloc1s5 | coding | downstream | 170476 | 20657214 ~ 20660349 (+) |
| txndc5 | LOC106590251 | coding | downstream | 187191 | 20673929 ~ 20689970 (+) |
| rec8b | rec8 | coding | downstream | 264446 | 20751184 ~ 20775305 (+) |
| G1267574 | NA | non-coding | upstream | 80694 | 20405571 ~ 20405800 (+) |
| G1267573 | NA | non-coding | upstream | 81327 | 20404932 ~ 20405167 (+) |
| G1267565 | NA | non-coding | upstream | 96966 | 20389277 ~ 20389528 (+) |
| G1267543 | NA | non-coding | upstream | 118148 | 20368102 ~ 20368346 (+) |
| G1267529 | NA | non-coding | upstream | 128227 | 20357998 ~ 20358267 (+) |
| G1267697 | NA | non-coding | downstream | 1478 | 20488216 ~ 20488446 (+) |
| G1267706 | NA | non-coding | downstream | 9748 | 20496486 ~ 20496975 (+) |
| G1267744 | NA | non-coding | downstream | 44326 | 20531064 ~ 20531308 (+) |
| G1267748 | NA | non-coding | downstream | 52690 | 20539428 ~ 20539735 (+) |
| G1267818 | NA | non-coding | downstream | 164832 | 20651570 ~ 20651775 (+) |
| epb41l3a | LOC106590342 | other | upstream | 806389 | 19598284 ~ 19680110 (+) |
| LOC110489737 | LOC106590377 | other | upstream | 1623983 | 18859697 ~ 18866106 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 4592330 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 4750077 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 4779955 | 15696896 ~ 15706601 (+) |
| G1267949 | pck2 | other | downstream | 353557 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 1299483 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 2646121 | 23132828 ~ 23146739 (+) |
| G1270643 | NA | other | downstream | 2890570 | 23377308 ~ 23377560 (+) |
| G1270652 | NA | other | downstream | 2919922 | 23406660 ~ 23408002 (+) |
