Gene
RNA
| Item | Value |
|---|---|
| gene id | G1267706 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 20496486 ~ 20496975 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1448307 | True | 324 | lncRNA | 0.34 | 2 | 20496486 | 20496975 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ofcc1 | ofcc1 | coding | upstream | 75729 | 20308647 ~ 20420757 (+) |
| tfap2a | tfap2a | coding | upstream | 331042 | 20152357 ~ 20165444 (+) |
| mak | mak | coding | upstream | 350178 | 20132757 ~ 20146308 (+) |
| gcm2 | LOC106590332 | coding | upstream | 402621 | 20088776 ~ 20093865 (+) |
| LOC110490828 | LOC101268971 | coding | upstream | 440506 | 20052629 ~ 20055980 (+) |
| slc35b3 | slc35b3 | coding | downstream | 69661 | 20566636 ~ 20582807 (+) |
| eef1e1 | eef1e1 | coding | downstream | 139619 | 20636594 ~ 20644188 (+) |
| bloc1s5 | bloc1s5 | coding | downstream | 160239 | 20657214 ~ 20660349 (+) |
| txndc5 | LOC106590251 | coding | downstream | 176954 | 20673929 ~ 20689970 (+) |
| rec8b | rec8 | coding | downstream | 254209 | 20751184 ~ 20775305 (+) |
| G1267697 | NA | non-coding | upstream | 8040 | 20488216 ~ 20488446 (+) |
| G1267695 | NA | non-coding | upstream | 9748 | 20486494 ~ 20486738 (+) |
| G1267574 | NA | non-coding | upstream | 90686 | 20405571 ~ 20405800 (+) |
| G1267573 | NA | non-coding | upstream | 91319 | 20404932 ~ 20405167 (+) |
| G1267565 | NA | non-coding | upstream | 106958 | 20389277 ~ 20389528 (+) |
| G1267744 | NA | non-coding | downstream | 34089 | 20531064 ~ 20531308 (+) |
| G1267748 | NA | non-coding | downstream | 42453 | 20539428 ~ 20539735 (+) |
| G1267818 | NA | non-coding | downstream | 154595 | 20651570 ~ 20651775 (+) |
| G1267819 | NA | non-coding | downstream | 156459 | 20653434 ~ 20653653 (+) |
| G1267830 | NA | non-coding | downstream | 193153 | 20690128 ~ 20690515 (+) |
| epb41l3a | LOC106590342 | other | upstream | 816381 | 19598284 ~ 19680110 (+) |
| LOC110489737 | LOC106590377 | other | upstream | 1633975 | 18859697 ~ 18866106 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 4602322 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 4760069 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 4789947 | 15696896 ~ 15706601 (+) |
| G1267949 | pck2 | other | downstream | 343320 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 1289246 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 2635884 | 23132828 ~ 23146739 (+) |
| G1270643 | NA | other | downstream | 2880333 | 23377308 ~ 23377560 (+) |
| G1270652 | NA | other | downstream | 2909685 | 23406660 ~ 23408002 (+) |
