Gene
RNA
| Item | Value |
|---|---|
| gene id | G1267830 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 20690128 ~ 20690515 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1448436 | True | 388 | lncRNA | 0.37 | 1 | 20690128 | 20690515 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| txndc5 | LOC106590251 | coding | upstream | 158 | 20673929 ~ 20689970 (+) |
| bloc1s5 | bloc1s5 | coding | upstream | 29779 | 20657214 ~ 20660349 (+) |
| eef1e1 | eef1e1 | coding | upstream | 45940 | 20636594 ~ 20644188 (+) |
| slc35b3 | slc35b3 | coding | upstream | 107321 | 20566636 ~ 20582807 (+) |
| ofcc1 | ofcc1 | coding | upstream | 269371 | 20308647 ~ 20420757 (+) |
| rec8b | rec8 | coding | downstream | 60669 | 20751184 ~ 20775305 (+) |
| nanog | LOC106590258 | coding | downstream | 101572 | 20792087 ~ 20795036 (+) |
| LOC110490942 | NA | coding | downstream | 112064 | 20801241 ~ 20804982 (+) |
| LOC110490943 | LOC106590259 | coding | downstream | 121894 | 20812409 ~ 20815510 (+) |
| LOC110489770 | psme1 | coding | downstream | 184352 | 20874867 ~ 20879233 (+) |
| G1267819 | NA | non-coding | upstream | 36475 | 20653434 ~ 20653653 (+) |
| G1267818 | NA | non-coding | upstream | 38353 | 20651570 ~ 20651775 (+) |
| G1267748 | NA | non-coding | upstream | 150393 | 20539428 ~ 20539735 (+) |
| G1267744 | NA | non-coding | upstream | 158820 | 20531064 ~ 20531308 (+) |
| G1267706 | NA | non-coding | upstream | 193153 | 20496486 ~ 20496975 (+) |
| G1267840 | NA | non-coding | downstream | 2269 | 20692784 ~ 20693031 (+) |
| G1267848 | NA | non-coding | downstream | 13045 | 20703560 ~ 20704163 (+) |
| G1267849 | NA | non-coding | downstream | 13815 | 20704330 ~ 20704668 (+) |
| G1267850 | NA | non-coding | downstream | 14498 | 20705013 ~ 20705219 (+) |
| G1267877 | NA | non-coding | downstream | 48380 | 20738895 ~ 20740840 (+) |
| epb41l3a | LOC106590342 | other | upstream | 1010023 | 19598284 ~ 19680110 (+) |
| LOC110489737 | LOC106590377 | other | upstream | 1827617 | 18859697 ~ 18866106 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 4795964 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 4953711 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 4983589 | 15696896 ~ 15706601 (+) |
| G1267949 | pck2 | other | downstream | 149780 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 1095706 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 2442344 | 23132828 ~ 23146739 (+) |
| G1270643 | NA | other | downstream | 2686793 | 23377308 ~ 23377560 (+) |
| G1270652 | NA | other | downstream | 2716145 | 23406660 ~ 23408002 (+) |
