G1267849


Basic Information

Item Value
gene id G1267849
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 20704330 ~ 20704668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1448455
GATATCAACCTTTTCATTTCAGCATTGtgacacataaaaaaaaacactattatTGCCCACTACTCTTTACATTTCATGATGAAAATTCTAAAGTTAGTTAGCATGTTTCCAATGCTAGCTGTTAGCATATGTTTCTAATTTAGCATTGTGCTCACCACTGCTGGTCTCCACTCTGATCTGGAGGCCCATGTTGTTGTGGGGACTCATCACCCACAGGTTACTGGTGGCCGTGATGTCAAACTCCAGCCAGCCCTCCTCGGCCGCCCACAGCCTGCGAGACTCCAGCAGGAACAGGTCTGCTTCCCTGGGGACACGGTTCACAACAAGGAGCCATGACTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1448455 True 339 lncRNA 0.47 1 20704330 20704668

Neighbor

gene id symbol gene type direction distance location
txndc5 LOC106590251 coding upstream 14360 20673929 ~ 20689970 (+)
bloc1s5 bloc1s5 coding upstream 43981 20657214 ~ 20660349 (+)
eef1e1 eef1e1 coding upstream 60142 20636594 ~ 20644188 (+)
slc35b3 slc35b3 coding upstream 121523 20566636 ~ 20582807 (+)
ofcc1 ofcc1 coding upstream 283573 20308647 ~ 20420757 (+)
rec8b rec8 coding downstream 46516 20751184 ~ 20775305 (+)
nanog LOC106590258 coding downstream 87419 20792087 ~ 20795036 (+)
LOC110490942 NA coding downstream 97911 20801241 ~ 20804982 (+)
LOC110490943 LOC106590259 coding downstream 107741 20812409 ~ 20815510 (+)
LOC110489770 psme1 coding downstream 170199 20874867 ~ 20879233 (+)
G1267848 NA non-coding upstream 167 20703560 ~ 20704163 (+)
G1267840 NA non-coding upstream 11299 20692784 ~ 20693031 (+)
G1267830 NA non-coding upstream 13815 20690128 ~ 20690515 (+)
G1267819 NA non-coding upstream 50677 20653434 ~ 20653653 (+)
G1267818 NA non-coding upstream 52555 20651570 ~ 20651775 (+)
G1267850 NA non-coding downstream 345 20705013 ~ 20705219 (+)
G1267877 NA non-coding downstream 34227 20738895 ~ 20740840 (+)
G1267867 NA non-coding downstream 73318 20777986 ~ 20778498 (+)
G1267962 NA non-coding downstream 197825 20902493 ~ 20902707 (+)
epb41l3a LOC106590342 other upstream 1024225 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 1841819 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 4810166 15885437 ~ 15895996 (+)
G1261980 NA other upstream 4967913 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 4997791 15696896 ~ 15706601 (+)
G1267949 pck2 other downstream 135627 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 1081553 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 2428191 23132828 ~ 23146739 (+)
G1270643 NA other downstream 2672640 23377308 ~ 23377560 (+)
G1270652 NA other downstream 2701992 23406660 ~ 23408002 (+)

Expression


Co-expression Network