G1267850


Basic Information

Item Value
gene id G1267850
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 20705013 ~ 20705219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1448456
acagtattGTGtgcatgttctaccaactgagccacataggacatttttgttttacattgtatAACATTCCTCTACTTCGTAACATccccccaccaccatcccctgCCCCACTGTATAACTGTAGCTAGGTCTCAGGTGCAAAAGACAACAACAAcccaatgaaagagagagagaagaagaaggagagaaaagaggtcTGTCCCCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1448456 True 207 lncRNA 0.44 1 20705013 20705219

Neighbor

gene id symbol gene type direction distance location
txndc5 LOC106590251 coding upstream 15043 20673929 ~ 20689970 (+)
bloc1s5 bloc1s5 coding upstream 44664 20657214 ~ 20660349 (+)
eef1e1 eef1e1 coding upstream 60825 20636594 ~ 20644188 (+)
slc35b3 slc35b3 coding upstream 122206 20566636 ~ 20582807 (+)
ofcc1 ofcc1 coding upstream 284256 20308647 ~ 20420757 (+)
rec8b rec8 coding downstream 45965 20751184 ~ 20775305 (+)
nanog LOC106590258 coding downstream 86868 20792087 ~ 20795036 (+)
LOC110490942 NA coding downstream 97360 20801241 ~ 20804982 (+)
LOC110490943 LOC106590259 coding downstream 107190 20812409 ~ 20815510 (+)
LOC110489770 psme1 coding downstream 169648 20874867 ~ 20879233 (+)
G1267849 NA non-coding upstream 345 20704330 ~ 20704668 (+)
G1267848 NA non-coding upstream 850 20703560 ~ 20704163 (+)
G1267840 NA non-coding upstream 11982 20692784 ~ 20693031 (+)
G1267830 NA non-coding upstream 14498 20690128 ~ 20690515 (+)
G1267819 NA non-coding upstream 51360 20653434 ~ 20653653 (+)
G1267877 NA non-coding downstream 33676 20738895 ~ 20740840 (+)
G1267867 NA non-coding downstream 72767 20777986 ~ 20778498 (+)
G1267962 NA non-coding downstream 197274 20902493 ~ 20902707 (+)
G1267965 NA non-coding downstream 199046 20904265 ~ 20904519 (+)
epb41l3a LOC106590342 other upstream 1024908 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 1842502 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 4810849 15885437 ~ 15895996 (+)
G1261980 NA other upstream 4968596 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 4998474 15696896 ~ 15706601 (+)
G1267949 pck2 other downstream 135076 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 1081002 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 2427640 23132828 ~ 23146739 (+)
G1270643 NA other downstream 2672089 23377308 ~ 23377560 (+)
G1270652 NA other downstream 2701441 23406660 ~ 23408002 (+)

Expression


Co-expression Network