G1267962


Basic Information

Item Value
gene id G1267962
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 20902493 ~ 20902707 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1448587
atttatttcatcacattcccagtgggtcagaagtttacaaacactcaattagtatttgatagcattgcctttaaattgtttaacttgggttaaatgtttcaagtagccttccacaataaactgggtgaattttggcattcctcctgacagagctggtgtaactgagtcaggtttgttggcctccttgctcgcacacgtttttcagttctgcccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1448587 True 215 lncRNA 0.40 1 20902493 20902707

Neighbor

gene id symbol gene type direction distance location
LOC110489770 psme1 coding upstream 23260 20874867 ~ 20879233 (+)
LOC110490943 LOC106590259 coding upstream 86983 20812409 ~ 20815510 (+)
LOC110490942 NA coding upstream 97511 20801241 ~ 20804982 (+)
nanog LOC106590258 coding upstream 107457 20792087 ~ 20795036 (+)
rec8b rec8 coding upstream 127188 20751184 ~ 20775305 (+)
zfhx2 zfhx2 coding downstream 4163 20906870 ~ 20920263 (+)
pabpn1 LOC106579615 coding downstream 24613 20927320 ~ 20943689 (+)
cebp1 LOC106590243 coding downstream 55708 20958415 ~ 20960083 (+)
slc22a17 slc22a17 coding downstream 69097 20971804 ~ 20983450 (+)
LOC100136149 LOC100136486 coding downstream 127950 21030657 ~ 21046564 (+)
G1267867 NA non-coding upstream 123995 20777986 ~ 20778498 (+)
G1267877 NA non-coding upstream 161653 20738895 ~ 20740840 (+)
G1267850 NA non-coding upstream 197274 20705013 ~ 20705219 (+)
G1267849 NA non-coding upstream 197825 20704330 ~ 20704668 (+)
G1267965 NA non-coding downstream 1558 20904265 ~ 20904519 (+)
G1267986 NA non-coding downstream 66575 20969282 ~ 20969935 (+)
G1268075 NA non-coding downstream 269255 21171962 ~ 21172222 (+)
G1268081 NA non-coding downstream 352554 21255261 ~ 21257850 (+)
G1267949 pck2 other upstream 61095 20840295 ~ 20841398 (+)
epb41l3a LOC106590342 other upstream 1222388 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 2039982 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 5008329 15885437 ~ 15895996 (+)
G1261980 NA other upstream 5166076 15735930 ~ 15736417 (+)
slc12a7b LOC106590280 other downstream 883514 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 2230152 23132828 ~ 23146739 (+)
G1270643 NA other downstream 2474601 23377308 ~ 23377560 (+)
G1270652 NA other downstream 2503953 23406660 ~ 23408002 (+)
G1270669 psme2 other downstream 2543131 23445838 ~ 23451494 (+)

Expression


Co-expression Network