Gene
RNA
| Item | Value |
|---|---|
| gene id | G1268075 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 21171962 ~ 21172222 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1448734 | True | 261 | lncRNA | 0.50 | 1 | 21171962 | 21172222 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489784 | LOC106590267 | coding | upstream | 10147 | 21145517 ~ 21161815 (+) |
| LOC110489785 | LOC106590267 | coding | upstream | 41657 | 21107774 ~ 21130305 (+) |
| LOC110490945 | LOC106589989 | coding | upstream | 79527 | 21084390 ~ 21092435 (+) |
| LOC110489782 | LOC106590268 | coding | upstream | 97862 | 21055658 ~ 21074100 (+) |
| LOC100136149 | LOC100136486 | coding | upstream | 125398 | 21030657 ~ 21046564 (+) |
| LOC110489799 | NA | coding | downstream | 475915 | 21648137 ~ 21649966 (+) |
| aoc1 | LOC106590278 | coding | downstream | 535514 | 21707736 ~ 21713134 (+) |
| slc12a7b | LOC106590280 | coding | downstream | 557533 | 21729755 ~ 21794253 (+) |
| si:ch211-276f18.2 | gfod1 | coding | downstream | 631930 | 21804152 ~ 21844069 (+) |
| LOC110489791 | LOC106590282 | coding | downstream | 737410 | 21909632 ~ 21991990 (+) |
| slc22a17 | slc22a17 | non-coding | upstream | 198628 | 20971804 ~ 20983450 (+) |
| G1267986 | NA | non-coding | upstream | 202027 | 20969282 ~ 20969935 (+) |
| G1267965 | NA | non-coding | upstream | 267443 | 20904265 ~ 20904519 (+) |
| G1267962 | NA | non-coding | upstream | 269255 | 20902493 ~ 20902707 (+) |
| LOC110490942 | NA | non-coding | upstream | 367200 | 20801241 ~ 20804982 (+) |
| G1268081 | NA | non-coding | downstream | 83039 | 21255261 ~ 21257850 (+) |
| G1268151 | NA | non-coding | downstream | 115409 | 21287631 ~ 21289238 (+) |
| G1268178 | NA | non-coding | downstream | 158854 | 21331076 ~ 21331425 (+) |
| G1268212 | NA | non-coding | downstream | 202664 | 21374886 ~ 21376176 (+) |
| G1268338 | NA | non-coding | downstream | 377623 | 21549845 ~ 21550143 (+) |
| G1267949 | pck2 | other | upstream | 330564 | 20840295 ~ 20841398 (+) |
| epb41l3a | LOC106590342 | other | upstream | 1491857 | 19598284 ~ 19680110 (+) |
| LOC110489737 | LOC106590377 | other | upstream | 2309451 | 18859697 ~ 18866106 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 5277798 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 5435545 | 15735930 ~ 15736417 (+) |
| LOC110489812 | rdh12 | other | downstream | 1960637 | 23132828 ~ 23146739 (+) |
| G1270643 | NA | other | downstream | 2205086 | 23377308 ~ 23377560 (+) |
| G1270652 | NA | other | downstream | 2234438 | 23406660 ~ 23408002 (+) |
| G1270669 | psme2 | other | downstream | 2273616 | 23445838 ~ 23451494 (+) |
