G1268772


Basic Information

Item Value
gene id G1268772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 21248017 ~ 21249031 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1449558
gacagactgagacagagagatggagagagactgagagagacagagagagacagactgagacggagagagacagacggagagagacagactgagacggagagagacagactgagacggagagagacagacagacagagagcgacagactgagactctgagagagacagacagacagagacagacagactgagagagacagacagagatggagagacaggcaTAGactgagagacaggcagagacaggcagagagtaagagagacagagactgagagaggcagagactgagagtcagacagactgagagagacagagactgtgcGAGACTGAGAGTCAGACAGATAAACTGAGAGAGACAGGCGGAGGCTGAGAGAGACAGGCGGAGGCTGAGAGAGACAGGCGGAGGCTGAGAGAGACAGGCGGAGGCTGAGAGAGACAGGCGGAGGCTGAGAGAGACAGTCggaggctgagagagacagacggaggctgagagagacagacggagactgagggacatggagacagagagacagacagagactgagagagcccAAGACAGTTATTAATAGAGACTTAGACAGTtattgagagagacagatactgagagagagacagagaatgacagggataaagagacagagaatgagagaaagacagcgactgagagagagatagacagcgactgagagacagacagtgactgagagggagacagacagagacagagagacaggtagagactgagacagacagattgagagagatagagactgagaGCGACAGGGACAGTTattgtgagagacagagagagacaggctgagacagagagagacagactgagacagacttaGACTGAGacagacttacagtgccttgcgaaagtattcggcccccttgaactttgcaaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1449558 True 995 lncRNA 0.50 2 21248017 21249031

Neighbor

gene id symbol gene type direction distance location
LOC110489781 NA coding downstream 210515 21018809 ~ 21037502 (-)
LOC110489780 NA coding downstream 240745 21002118 ~ 21007272 (-)
ngdn ngdn coding downstream 293210 20948900 ~ 20954807 (-)
thtpa NA coding downstream 341541 20904229 ~ 20906476 (-)
dcaf11 dcaf11 coding downstream 346061 20884973 ~ 20901956 (-)
kcnh2b LOC106590277 coding upstream 63188 21312219 ~ 21614730 (-)
scospondin sspo coding upstream 368388 21617419 ~ 21680364 (-)
LOC110489796 LOC106590244 coding upstream 604669 21853700 ~ 21864113 (-)
LOC110489804 LOC106590285 coding upstream 966440 22215471 ~ 22311271 (-)
LOC110489802 LOC106590287 coding upstream 1063765 22312796 ~ 22359506 (-)
G1268771 NA non-coding downstream 1480 21245873 ~ 21246537 (-)
G1268764 NA non-coding downstream 13114 21234477 ~ 21234903 (-)
G1268763 NA non-coding downstream 19272 21227904 ~ 21228745 (-)
G1268618 LOC106579614 non-coding downstream 261339 20981780 ~ 20986678 (-)
G1268610 NA non-coding downstream 276374 20971336 ~ 20971643 (-)
LOC110489787 LOC106579666 non-coding upstream 6232 21174593 ~ 21296726 (-)
G1268745 NA non-coding upstream 65964 21314995 ~ 21398420 (-)
G1268793 NA non-coding upstream 134325 21383356 ~ 21383844 (-)
G1268964 NA non-coding upstream 303613 21552644 ~ 21552950 (-)
G1268966 NA non-coding upstream 305024 21554055 ~ 21554300 (-)
G1268555 LOC106590243 other downstream 287928 20958372 ~ 20960089 (-)
G1267452 NA other downstream 957344 20290350 ~ 20290673 (-)
G1267414 NA other downstream 979529 20267966 ~ 20268488 (-)
G1266708 LOC106590345 other downstream 1794247 19435018 ~ 19453770 (-)
G1266471 NA other downstream 2138660 19108559 ~ 19109357 (-)
G1269265 NA other upstream 553656 21802687 ~ 21803352 (-)
G1271421 NA other upstream 2464324 23713355 ~ 23728939 (-)
G1274532 LOC106590196 other upstream 4797217 26046058 ~ 26048599 (-)
G1275015 NA other upstream 5262494 26511525 ~ 26512075 (-)
G1275016 LOC106590191 other upstream 5305937 26554968 ~ 26562033 (-)

Expression


Co-expression Network