Gene
RNA
| Item | Value |
|---|---|
| gene id | G1268793 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 21383356 ~ 21383844 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1449580 | True | 414 | lncRNA | 0.43 | 3 | 21383356 | 21383844 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489787 | LOC106579666 | coding | downstream | 86630 | 21174593 ~ 21296726 (-) |
| LOC110489781 | NA | coding | downstream | 345854 | 21018809 ~ 21037502 (-) |
| LOC110489780 | NA | coding | downstream | 376084 | 21002118 ~ 21007272 (-) |
| ngdn | ngdn | coding | downstream | 428549 | 20948900 ~ 20954807 (-) |
| thtpa | NA | coding | downstream | 476880 | 20904229 ~ 20906476 (-) |
| scospondin | sspo | coding | upstream | 233575 | 21617419 ~ 21680364 (-) |
| LOC110489796 | LOC106590244 | coding | upstream | 469856 | 21853700 ~ 21864113 (-) |
| LOC110489804 | LOC106590285 | coding | upstream | 831627 | 22215471 ~ 22311271 (-) |
| LOC110489802 | LOC106590287 | coding | upstream | 928952 | 22312796 ~ 22359506 (-) |
| LOC110489790 | LOC106590241 | coding | upstream | 983687 | 22367531 ~ 22446695 (-) |
| G1268772 | NA | non-coding | downstream | 134325 | 21248017 ~ 21249031 (-) |
| G1268771 | NA | non-coding | downstream | 136819 | 21245873 ~ 21246537 (-) |
| G1268764 | NA | non-coding | downstream | 148453 | 21234477 ~ 21234903 (-) |
| G1268763 | NA | non-coding | downstream | 154611 | 21227904 ~ 21228745 (-) |
| G1268964 | NA | non-coding | upstream | 168800 | 21552644 ~ 21552950 (-) |
| G1268966 | NA | non-coding | upstream | 170211 | 21554055 ~ 21554300 (-) |
| G1268998 | NA | non-coding | upstream | 216842 | 21600686 ~ 21600895 (-) |
| G1269176 | NA | non-coding | upstream | 240976 | 21624820 ~ 21626499 (-) |
| G1269191 | sspo | non-coding | upstream | 305943 | 21689787 ~ 21691301 (-) |
| G1268555 | LOC106590243 | other | downstream | 423267 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 1092683 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 1114868 | 20267966 ~ 20268488 (-) |
| G1266708 | LOC106590345 | other | downstream | 1929586 | 19435018 ~ 19453770 (-) |
| G1266471 | NA | other | downstream | 2273999 | 19108559 ~ 19109357 (-) |
| G1269265 | NA | other | upstream | 418843 | 21802687 ~ 21803352 (-) |
| G1271421 | NA | other | upstream | 2329511 | 23713355 ~ 23728939 (-) |
| G1274532 | LOC106590196 | other | upstream | 4662404 | 26046058 ~ 26048599 (-) |
| G1275015 | NA | other | upstream | 5127681 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 5171124 | 26554968 ~ 26562033 (-) |
