G1269264


Basic Information

Item Value
gene id G1269264
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 21799864 ~ 21800419 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1450120
cacccatccgtagcacgcgctccagcaggtgtatctcactgatcatccctaaagccaacacctcatttggccgcctttcgttccagtactctgctgcctgtgactggaacgaattgcaaaaatcgctgaagttggagacttttatctccctcaccaacttcaaacatcagctatctgagcagctaaccgatcgctgcagctgtacatagtctattggtaaatagcccacccattttcacctacctcatccccatactgtttttatttatttacttttctgctcttttgcacaccaatatctctacctgtacatgaccatctgatcatttatcactccagtgttaatctgcaaaattgtaattattcgcctacctcatgccttttgcacacattgtatatagactccccctttgtgttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgctcatactgctatgctttatcttggccaggttgcagttgcaaatgagaacttgttctcaactagcctacctggttaaataaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1450120 True 556 lncRNA 0.43 1 21799864 21800419

Neighbor

gene id symbol gene type direction distance location
scospondin sspo coding downstream 119500 21617419 ~ 21680364 (-)
kcnh2b LOC106590277 coding downstream 185134 21312219 ~ 21614730 (-)
LOC110489787 LOC106579666 coding downstream 503138 21174593 ~ 21296726 (-)
LOC110489781 NA coding downstream 762362 21018809 ~ 21037502 (-)
LOC110489780 NA coding downstream 792592 21002118 ~ 21007272 (-)
LOC110489796 LOC106590244 coding upstream 53281 21853700 ~ 21864113 (-)
LOC110489804 LOC106590285 coding upstream 415052 22215471 ~ 22311271 (-)
LOC110489802 LOC106590287 coding upstream 512377 22312796 ~ 22359506 (-)
LOC110489790 LOC106590241 coding upstream 567112 22367531 ~ 22446695 (-)
LOC110489807 LOC106590288 coding upstream 843922 22644341 ~ 22676386 (-)
G1269256 LOC106590280 non-coding downstream 11026 21786522 ~ 21788838 (-)
G1269252 LOC106590280 non-coding downstream 21954 21776553 ~ 21777910 (-)
G1269193 sspo non-coding downstream 107666 21691814 ~ 21692198 (-)
G1269191 sspo non-coding downstream 108563 21689787 ~ 21691301 (-)
G1269176 NA non-coding downstream 173365 21624820 ~ 21626499 (-)
G1269271 gfod1 non-coding upstream 39850 21840269 ~ 21867424 (-)
G1269331 NA non-coding upstream 99610 21900029 ~ 21900228 (-)
G1269337 NA non-coding upstream 103126 21903545 ~ 21904016 (-)
G1269387 LOC106590282 non-coding upstream 109407 21909826 ~ 21951219 (-)
G1269434 NA non-coding upstream 190427 21990846 ~ 21991885 (-)
G1268555 LOC106590243 other downstream 839775 20958372 ~ 20960089 (-)
G1267452 NA other downstream 1509191 20290350 ~ 20290673 (-)
G1267414 NA other downstream 1531376 20267966 ~ 20268488 (-)
G1266708 LOC106590345 other downstream 2346094 19435018 ~ 19453770 (-)
G1266471 NA other downstream 2690507 19108559 ~ 19109357 (-)
G1269265 NA other upstream 2268 21802687 ~ 21803352 (-)
G1271421 NA other upstream 1912936 23713355 ~ 23728939 (-)
G1274532 LOC106590196 other upstream 4245829 26046058 ~ 26048599 (-)
G1275015 NA other upstream 4711106 26511525 ~ 26512075 (-)
G1275016 LOC106590191 other upstream 4754549 26554968 ~ 26562033 (-)

Expression


Co-expression Network