G1269119


Basic Information

Item Value
gene id G1269119
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 21802820 ~ 21803102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1449932
ctgcagtagactgcaactcctccccctttggcagttctatcttgacggaagatgttatagttgggtatggagatctctgaatttttggtggccttcctgagccaggattcagacacagcaaggacatcagggttagcagagtgtgctagagcagtgagtaaaacaaacttagggaggaggcttctgatgttgacatgcatgaaaccaaggctttttcgatcacagaagtcaacaaatgagggtgcctggggacatgcagggcctgggtttacctccacatcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1449932 True 283 lncRNA 0.49 1 21802820 21803102

Neighbor

gene id symbol gene type direction distance location
slc12a7b LOC106590280 coding upstream 8569 21729755 ~ 21794253 (+)
aoc1 LOC106590278 coding upstream 89686 21707736 ~ 21713134 (+)
LOC110489799 NA coding upstream 152854 21648137 ~ 21649966 (+)
LOC110489784 LOC106590267 coding upstream 641005 21145517 ~ 21161815 (+)
LOC110489785 LOC106590267 coding upstream 672515 21107774 ~ 21130305 (+)
si:ch211-276f18.2 gfod1 coding downstream 1050 21804152 ~ 21844069 (+)
LOC110489791 LOC106590282 coding downstream 106530 21909632 ~ 21991990 (+)
LOC110489805 LOC106590283 coding downstream 193716 21996818 ~ 22054060 (+)
tgfbr1b LOC106590284 coding downstream 258682 22061784 ~ 22125370 (+)
lancl2 lancl2 coding downstream 349728 22152830 ~ 22215450 (+)
G1269117 NA non-coding upstream 2410 21799863 ~ 21800410 (+)
G1269116 NA non-coding upstream 3042 21799553 ~ 21799778 (+)
G1269113 NA non-coding upstream 5012 21797520 ~ 21797808 (+)
G1269086 NA non-coding upstream 75297 21727220 ~ 21727523 (+)
G1269161 NA non-coding downstream 65057 21868159 ~ 21883333 (+)
G1269171 NA non-coding downstream 81978 21885080 ~ 21885399 (+)
G1269330 NA non-coding downstream 96880 21899982 ~ 21900235 (+)
G1269333 NA non-coding downstream 99499 21902601 ~ 21902802 (+)
G1269340 NA non-coding downstream 102858 21905960 ~ 21906546 (+)
G1267949 pck2 other upstream 961422 20840295 ~ 20841398 (+)
epb41l3a LOC106590342 other upstream 2122715 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 2940309 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 5908656 15885437 ~ 15895996 (+)
LOC110489812 rdh12 other downstream 1329757 23132828 ~ 23146739 (+)
G1270643 NA other downstream 1574206 23377308 ~ 23377560 (+)
G1270652 NA other downstream 1603558 23406660 ~ 23408002 (+)
G1270669 psme2 other downstream 1642736 23445838 ~ 23451494 (+)
LOC110489839 LOC106590236 other downstream 1863369 23666471 ~ 23836438 (+)

Expression


Co-expression Network