G1269330


Basic Information

Item Value
gene id G1269330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 21899982 ~ 21900235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1450194
gccggaggaaacaccgtgcacctggccaccttggctagcgtacactgcgcccagcccgccacaggagtcgctggtgcgcgatgagacaaggacacccctaccgaccaagccctccctaacccgggcgacgctaggccaattgtgcgtcgccccacggacctcccggtcgcggccggttacgacagagcctgggcgcgaatccaggactctgatggcacagctggcgctgcagtacagcgcccttaaccactgcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1450194 True 254 lncRNA 0.67 1 21899982 21900235

Neighbor

gene id symbol gene type direction distance location
si:ch211-276f18.2 gfod1 coding upstream 55913 21804152 ~ 21844069 (+)
slc12a7b LOC106590280 coding upstream 105731 21729755 ~ 21794253 (+)
aoc1 LOC106590278 coding upstream 186848 21707736 ~ 21713134 (+)
LOC110489799 NA coding upstream 250016 21648137 ~ 21649966 (+)
LOC110489784 LOC106590267 coding upstream 738167 21145517 ~ 21161815 (+)
LOC110489791 LOC106590282 coding downstream 9397 21909632 ~ 21991990 (+)
LOC110489805 LOC106590283 coding downstream 96583 21996818 ~ 22054060 (+)
tgfbr1b LOC106590284 coding downstream 161549 22061784 ~ 22125370 (+)
lancl2 lancl2 coding downstream 252595 22152830 ~ 22215450 (+)
LOC110489808 LOC106590291 coding downstream 1062577 22962812 ~ 23028566 (+)
G1269171 NA non-coding upstream 14583 21885080 ~ 21885399 (+)
G1269161 NA non-coding upstream 16649 21868159 ~ 21883333 (+)
G1269119 NA non-coding upstream 96880 21802820 ~ 21803102 (+)
G1269117 NA non-coding upstream 99572 21799863 ~ 21800410 (+)
G1269116 NA non-coding upstream 100204 21799553 ~ 21799778 (+)
G1269333 NA non-coding downstream 2366 21902601 ~ 21902802 (+)
G1269340 NA non-coding downstream 5725 21905960 ~ 21906546 (+)
G1269351 NA non-coding downstream 23110 21923345 ~ 21924507 (+)
G1269513 NA non-coding downstream 226333 22126568 ~ 22130052 (+)
G1267949 pck2 other upstream 1058584 20840295 ~ 20841398 (+)
epb41l3a LOC106590342 other upstream 2219877 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 3037471 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 6005818 15885437 ~ 15895996 (+)
LOC110489812 rdh12 other downstream 1232624 23132828 ~ 23146739 (+)
G1270643 NA other downstream 1477073 23377308 ~ 23377560 (+)
G1270652 NA other downstream 1506425 23406660 ~ 23408002 (+)
G1270669 psme2 other downstream 1545603 23445838 ~ 23451494 (+)
LOC110489839 LOC106590236 other downstream 1766236 23666471 ~ 23836438 (+)

Expression


Co-expression Network