G1269333


Basic Information

Item Value
gene id G1269333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 21902601 ~ 21902802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1450197
ctgtgagagtaaccattgggttcttggtcacctccctgaccaaggcccttctcccccgattgctcagtttggcccggtggccaaatcatgttcaatcaattgattttaccacaggtggactccaatcaagttgtagaaacacctcaaggatgatcaatggaaccagggtgcacctgagctcaacttcaagtctcatagcaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1450197 True 202 lncRNA 0.49 1 21902601 21902802

Neighbor

gene id symbol gene type direction distance location
si:ch211-276f18.2 gfod1 coding upstream 58532 21804152 ~ 21844069 (+)
slc12a7b LOC106590280 coding upstream 108350 21729755 ~ 21794253 (+)
aoc1 LOC106590278 coding upstream 189467 21707736 ~ 21713134 (+)
LOC110489799 NA coding upstream 252635 21648137 ~ 21649966 (+)
LOC110489784 LOC106590267 coding upstream 740786 21145517 ~ 21161815 (+)
LOC110489791 LOC106590282 coding downstream 6830 21909632 ~ 21991990 (+)
LOC110489805 LOC106590283 coding downstream 94016 21996818 ~ 22054060 (+)
tgfbr1b LOC106590284 coding downstream 158982 22061784 ~ 22125370 (+)
lancl2 lancl2 coding downstream 250028 22152830 ~ 22215450 (+)
LOC110489808 LOC106590291 coding downstream 1060010 22962812 ~ 23028566 (+)
G1269330 NA non-coding upstream 2366 21899982 ~ 21900235 (+)
G1269171 NA non-coding upstream 17202 21885080 ~ 21885399 (+)
G1269161 NA non-coding upstream 19268 21868159 ~ 21883333 (+)
G1269119 NA non-coding upstream 99499 21802820 ~ 21803102 (+)
G1269117 NA non-coding upstream 102191 21799863 ~ 21800410 (+)
G1269340 NA non-coding downstream 3158 21905960 ~ 21906546 (+)
G1269351 NA non-coding downstream 20543 21923345 ~ 21924507 (+)
G1269513 NA non-coding downstream 223766 22126568 ~ 22130052 (+)
G1269737 NA non-coding downstream 413545 22316347 ~ 22350514 (+)
G1267949 pck2 other upstream 1061203 20840295 ~ 20841398 (+)
epb41l3a LOC106590342 other upstream 2222496 19598284 ~ 19680110 (+)
LOC110489737 LOC106590377 other upstream 3040090 18859697 ~ 18866106 (+)
mcmdc2 mcmdc2 other upstream 6008437 15885437 ~ 15895996 (+)
LOC110489812 rdh12 other downstream 1230057 23132828 ~ 23146739 (+)
G1270643 NA other downstream 1474506 23377308 ~ 23377560 (+)
G1270652 NA other downstream 1503858 23406660 ~ 23408002 (+)
G1270669 psme2 other downstream 1543036 23445838 ~ 23451494 (+)
LOC110489839 LOC106590236 other downstream 1763669 23666471 ~ 23836438 (+)

Expression


Co-expression Network