Gene
RNA
| Item | Value |
|---|---|
| gene id | G1269869 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 22153173 ~ 22153886 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1450776 | True | 714 | lncRNA | 0.40 | 1 | 22153173 | 22153886 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489796 | LOC106590244 | coding | downstream | 289060 | 21853700 ~ 21864113 (-) |
| scospondin | sspo | coding | downstream | 472809 | 21617419 ~ 21680364 (-) |
| kcnh2b | LOC106590277 | coding | downstream | 538443 | 21312219 ~ 21614730 (-) |
| LOC110489787 | LOC106579666 | coding | downstream | 856447 | 21174593 ~ 21296726 (-) |
| LOC110489781 | NA | coding | downstream | 1115671 | 21018809 ~ 21037502 (-) |
| LOC110489804 | LOC106590285 | coding | upstream | 61585 | 22215471 ~ 22311271 (-) |
| LOC110489802 | LOC106590287 | coding | upstream | 158910 | 22312796 ~ 22359506 (-) |
| LOC110489790 | LOC106590241 | coding | upstream | 213645 | 22367531 ~ 22446695 (-) |
| LOC110489807 | LOC106590288 | coding | upstream | 490455 | 22644341 ~ 22676386 (-) |
| LOC118938910 | NA | coding | upstream | 641678 | 22795564 ~ 22796979 (-) |
| G1269623 | NA | non-coding | downstream | 1503 | 22151439 ~ 22151670 (-) |
| G1269603 | NA | non-coding | downstream | 20950 | 22131977 ~ 22132223 (-) |
| G1269588 | NA | non-coding | downstream | 23122 | 22125710 ~ 22130051 (-) |
| G1269434 | NA | non-coding | downstream | 161288 | 21990846 ~ 21991885 (-) |
| G1269387 | LOC106590282 | non-coding | downstream | 201954 | 21909826 ~ 21951219 (-) |
| G1269870 | lancl2 | non-coding | upstream | 353 | 22154239 ~ 22181679 (-) |
| G1269923 | NA | non-coding | upstream | 77633 | 22231519 ~ 22278813 (-) |
| G1270080 | NA | non-coding | upstream | 352068 | 22505954 ~ 22507435 (-) |
| G1270094 | NA | non-coding | upstream | 378210 | 22532096 ~ 22532307 (-) |
| G1269265 | NA | other | downstream | 349821 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 1193084 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 1862500 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 1884685 | 20267966 ~ 20268488 (-) |
| G1266708 | LOC106590345 | other | downstream | 2699403 | 19435018 ~ 19453770 (-) |
| G1271421 | NA | other | upstream | 1559469 | 23713355 ~ 23728939 (-) |
| G1274532 | LOC106590196 | other | upstream | 3892362 | 26046058 ~ 26048599 (-) |
| G1275015 | NA | other | upstream | 4357639 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 4401082 | 26554968 ~ 26562033 (-) |
| LOC110489888 | gli3 | other | upstream | 4416392 | 26566351 ~ 26694581 (-) |
