Gene
RNA
| Item | Value |
|---|---|
| gene id | G1270105 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 22537977 ~ 22538213 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1451017 | True | 237 | lncRNA | 0.39 | 1 | 22537977 | 22538213 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489790 | LOC106590241 | coding | downstream | 91282 | 22367531 ~ 22446695 (-) |
| LOC110489802 | LOC106590287 | coding | downstream | 178471 | 22312796 ~ 22359506 (-) |
| LOC110489804 | LOC106590285 | coding | downstream | 226706 | 22215471 ~ 22311271 (-) |
| LOC110489796 | LOC106590244 | coding | downstream | 673864 | 21853700 ~ 21864113 (-) |
| scospondin | sspo | coding | downstream | 857613 | 21617419 ~ 21680364 (-) |
| LOC110489807 | LOC106590288 | coding | upstream | 106128 | 22644341 ~ 22676386 (-) |
| LOC118938910 | NA | coding | upstream | 257351 | 22795564 ~ 22796979 (-) |
| LOC110490829 | LOC106590245 | coding | upstream | 359899 | 22898112 ~ 22899241 (-) |
| si:dkey-225n22.4 | LOC106590290 | coding | upstream | 369703 | 22907916 ~ 22955764 (-) |
| LOC110489811 | LOC106590294 | coding | upstream | 522471 | 23060684 ~ 23122826 (-) |
| G1270094 | NA | non-coding | downstream | 5670 | 22532096 ~ 22532307 (-) |
| G1270080 | NA | non-coding | downstream | 30542 | 22505954 ~ 22507435 (-) |
| G1269923 | NA | non-coding | downstream | 259164 | 22231519 ~ 22278813 (-) |
| G1269870 | lancl2 | non-coding | downstream | 356298 | 22154239 ~ 22181679 (-) |
| G1270119 | NA | non-coding | upstream | 7052 | 22545265 ~ 22545471 (-) |
| G1270139 | NA | non-coding | upstream | 12781 | 22550994 ~ 22551232 (-) |
| G1270181 | NA | non-coding | upstream | 45315 | 22583528 ~ 22583835 (-) |
| G1270184 | NA | non-coding | upstream | 47130 | 22585343 ~ 22585587 (-) |
| G1271047 | NA | non-coding | upstream | 263102 | 22801315 ~ 22805575 (-) |
| G1269265 | NA | other | downstream | 734625 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 1577888 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 2247304 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 2269489 | 20267966 ~ 20268488 (-) |
| G1266708 | LOC106590345 | other | downstream | 3084207 | 19435018 ~ 19453770 (-) |
| G1271421 | NA | other | upstream | 1175142 | 23713355 ~ 23728939 (-) |
| G1274532 | LOC106590196 | other | upstream | 3508035 | 26046058 ~ 26048599 (-) |
| G1275015 | NA | other | upstream | 3973312 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 4016755 | 26554968 ~ 26562033 (-) |
| LOC110489888 | gli3 | other | upstream | 4032065 | 26566351 ~ 26694581 (-) |
