Gene
RNA
| Item | Value |
|---|---|
| gene id | G1270119 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 22545265 ~ 22545471 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nucleotide-binding oligomerization domain-containing protein 2 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1451031 | True | 207 | lncRNA | 0.39 | 1 | 22545265 | 22545471 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489790 | LOC106590241 | coding | downstream | 98570 | 22367531 ~ 22446695 (-) |
| LOC110489802 | LOC106590287 | coding | downstream | 185759 | 22312796 ~ 22359506 (-) |
| LOC110489804 | LOC106590285 | coding | downstream | 233994 | 22215471 ~ 22311271 (-) |
| LOC110489796 | LOC106590244 | coding | downstream | 681152 | 21853700 ~ 21864113 (-) |
| scospondin | sspo | coding | downstream | 864901 | 21617419 ~ 21680364 (-) |
| LOC110489807 | LOC106590288 | coding | upstream | 98870 | 22644341 ~ 22676386 (-) |
| LOC118938910 | NA | coding | upstream | 250093 | 22795564 ~ 22796979 (-) |
| LOC110490829 | LOC106590245 | coding | upstream | 352641 | 22898112 ~ 22899241 (-) |
| si:dkey-225n22.4 | LOC106590290 | coding | upstream | 362445 | 22907916 ~ 22955764 (-) |
| LOC110489811 | LOC106590294 | coding | upstream | 515213 | 23060684 ~ 23122826 (-) |
| G1270105 | NA | non-coding | downstream | 7052 | 22537977 ~ 22538213 (-) |
| G1270094 | NA | non-coding | downstream | 12958 | 22532096 ~ 22532307 (-) |
| G1270080 | NA | non-coding | downstream | 37830 | 22505954 ~ 22507435 (-) |
| G1269923 | NA | non-coding | downstream | 266452 | 22231519 ~ 22278813 (-) |
| G1270139 | NA | non-coding | upstream | 5523 | 22550994 ~ 22551232 (-) |
| G1270181 | NA | non-coding | upstream | 38057 | 22583528 ~ 22583835 (-) |
| G1270184 | NA | non-coding | upstream | 39872 | 22585343 ~ 22585587 (-) |
| G1271047 | NA | non-coding | upstream | 255844 | 22801315 ~ 22805575 (-) |
| G1271074 | NA | non-coding | upstream | 287734 | 22833205 ~ 22834370 (-) |
| G1269265 | NA | other | downstream | 741913 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 1585176 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 2254592 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 2276777 | 20267966 ~ 20268488 (-) |
| G1266708 | LOC106590345 | other | downstream | 3091495 | 19435018 ~ 19453770 (-) |
| G1271421 | NA | other | upstream | 1167884 | 23713355 ~ 23728939 (-) |
| G1274532 | LOC106590196 | other | upstream | 3500777 | 26046058 ~ 26048599 (-) |
| G1275015 | NA | other | upstream | 3966054 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 4009497 | 26554968 ~ 26562033 (-) |
| LOC110489888 | gli3 | other | upstream | 4024807 | 26566351 ~ 26694581 (-) |
