Gene
RNA
| Item | Value |
|---|---|
| gene id | G1270184 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 22585343 ~ 22585587 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1451097 | True | 245 | lncRNA | 0.41 | 1 | 22585343 | 22585587 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489790 | LOC106590241 | coding | downstream | 138648 | 22367531 ~ 22446695 (-) |
| LOC110489802 | LOC106590287 | coding | downstream | 225837 | 22312796 ~ 22359506 (-) |
| LOC110489804 | LOC106590285 | coding | downstream | 274072 | 22215471 ~ 22311271 (-) |
| LOC110489796 | LOC106590244 | coding | downstream | 721230 | 21853700 ~ 21864113 (-) |
| scospondin | sspo | coding | downstream | 904979 | 21617419 ~ 21680364 (-) |
| LOC110489807 | LOC106590288 | coding | upstream | 58754 | 22644341 ~ 22676386 (-) |
| LOC118938910 | NA | coding | upstream | 209977 | 22795564 ~ 22796979 (-) |
| LOC110490829 | LOC106590245 | coding | upstream | 312525 | 22898112 ~ 22899241 (-) |
| si:dkey-225n22.4 | LOC106590290 | coding | upstream | 322329 | 22907916 ~ 22955764 (-) |
| LOC110489811 | LOC106590294 | coding | upstream | 475097 | 23060684 ~ 23122826 (-) |
| G1270181 | NA | non-coding | downstream | 1508 | 22583528 ~ 22583835 (-) |
| G1270139 | NA | non-coding | downstream | 34111 | 22550994 ~ 22551232 (-) |
| G1270119 | NA | non-coding | downstream | 39872 | 22545265 ~ 22545471 (-) |
| G1270105 | NA | non-coding | downstream | 47130 | 22537977 ~ 22538213 (-) |
| G1270094 | NA | non-coding | downstream | 53036 | 22532096 ~ 22532307 (-) |
| G1271047 | NA | non-coding | upstream | 215728 | 22801315 ~ 22805575 (-) |
| G1271074 | NA | non-coding | upstream | 247618 | 22833205 ~ 22834370 (-) |
| G1271082 | NA | non-coding | upstream | 254899 | 22840486 ~ 22840912 (-) |
| G1271085 | NA | non-coding | upstream | 258011 | 22843598 ~ 22843829 (-) |
| G1271201 | NA | non-coding | upstream | 437718 | 23023305 ~ 23026796 (-) |
| G1269265 | NA | other | downstream | 781991 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 1625254 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 2294670 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 2316855 | 20267966 ~ 20268488 (-) |
| G1266708 | LOC106590345 | other | downstream | 3131573 | 19435018 ~ 19453770 (-) |
| G1271421 | NA | other | upstream | 1127768 | 23713355 ~ 23728939 (-) |
| G1274532 | LOC106590196 | other | upstream | 3460661 | 26046058 ~ 26048599 (-) |
| G1275015 | NA | other | upstream | 3925938 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 3969381 | 26554968 ~ 26562033 (-) |
| LOC110489888 | gli3 | other | upstream | 3984691 | 26566351 ~ 26694581 (-) |
