Gene
RNA
| Item | Value |
|---|---|
| gene id | G1271085 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 22843598 ~ 22843829 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1452092 | True | 232 | lncRNA | 0.41 | 1 | 22843598 | 22843829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938910 | NA | coding | downstream | 46619 | 22795564 ~ 22796979 (-) |
| LOC110489807 | LOC106590288 | coding | downstream | 167212 | 22644341 ~ 22676386 (-) |
| LOC110489790 | LOC106590241 | coding | downstream | 396903 | 22367531 ~ 22446695 (-) |
| LOC110489802 | LOC106590287 | coding | downstream | 484092 | 22312796 ~ 22359506 (-) |
| LOC110489804 | LOC106590285 | coding | downstream | 532327 | 22215471 ~ 22311271 (-) |
| LOC110490829 | LOC106590245 | coding | upstream | 54283 | 22898112 ~ 22899241 (-) |
| si:dkey-225n22.4 | LOC106590290 | coding | upstream | 64087 | 22907916 ~ 22955764 (-) |
| LOC110489811 | LOC106590294 | coding | upstream | 216855 | 23060684 ~ 23122826 (-) |
| LOC110489813 | LOC106590295 | coding | upstream | 303040 | 23146869 ~ 23156952 (-) |
| pks1 | LOC106590299 | coding | upstream | 368288 | 23212117 ~ 23221568 (-) |
| G1271082 | NA | non-coding | downstream | 2686 | 22840486 ~ 22840912 (-) |
| G1271074 | NA | non-coding | downstream | 9228 | 22833205 ~ 22834370 (-) |
| G1271047 | NA | non-coding | downstream | 38023 | 22801315 ~ 22805575 (-) |
| G1270184 | NA | non-coding | downstream | 258011 | 22585343 ~ 22585587 (-) |
| G1270181 | NA | non-coding | downstream | 259763 | 22583528 ~ 22583835 (-) |
| G1271201 | NA | non-coding | upstream | 179476 | 23023305 ~ 23026796 (-) |
| G1271285 | NA | non-coding | upstream | 332041 | 23175870 ~ 23176099 (-) |
| G1271287 | NA | non-coding | upstream | 334163 | 23177992 ~ 23178191 (-) |
| G1271297 | LOC106590247 | non-coding | upstream | 352623 | 23196452 ~ 23203364 (-) |
| G1271299 | NA | non-coding | upstream | 360758 | 23204587 ~ 23204788 (-) |
| G1269265 | NA | other | downstream | 1040246 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 1883509 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 2552925 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 2575110 | 20267966 ~ 20268488 (-) |
| G1266708 | LOC106590345 | other | downstream | 3389828 | 19435018 ~ 19453770 (-) |
| G1271421 | NA | other | upstream | 869526 | 23713355 ~ 23728939 (-) |
| G1274532 | LOC106590196 | other | upstream | 3202419 | 26046058 ~ 26048599 (-) |
| G1275015 | NA | other | upstream | 3667696 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 3711139 | 26554968 ~ 26562033 (-) |
| LOC110489888 | gli3 | other | upstream | 3726449 | 26566351 ~ 26694581 (-) |
