Gene
RNA
| Item | Value |
|---|---|
| gene id | G1271287 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 23177992 ~ 23178191 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1452306 | True | 200 | lncRNA | 0.39 | 1 | 23177992 | 23178191 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489813 | LOC106590295 | coding | downstream | 21040 | 23146869 ~ 23156952 (-) |
| LOC110489811 | LOC106590294 | coding | downstream | 55166 | 23060684 ~ 23122826 (-) |
| si:dkey-225n22.4 | LOC106590290 | coding | downstream | 222228 | 22907916 ~ 22955764 (-) |
| LOC110490829 | LOC106590245 | coding | downstream | 278751 | 22898112 ~ 22899241 (-) |
| LOC118938910 | NA | coding | downstream | 381013 | 22795564 ~ 22796979 (-) |
| pks1 | LOC106590299 | coding | upstream | 33926 | 23212117 ~ 23221568 (-) |
| LOC110489819 | LOC106590300 | coding | upstream | 43501 | 23221692 ~ 23242314 (-) |
| acbd5a | acbd5 | coding | upstream | 75695 | 23253886 ~ 23275145 (-) |
| LOC118938792 | NA | coding | upstream | 157281 | 23335472 ~ 23337723 (-) |
| LOC110489827 | NA | coding | upstream | 159691 | 23337882 ~ 23339790 (-) |
| G1271285 | NA | non-coding | downstream | 1893 | 23175870 ~ 23176099 (-) |
| G1271201 | NA | non-coding | downstream | 151196 | 23023305 ~ 23026796 (-) |
| G1271085 | NA | non-coding | downstream | 334163 | 22843598 ~ 22843829 (-) |
| G1271082 | NA | non-coding | downstream | 337080 | 22840486 ~ 22840912 (-) |
| G1271074 | NA | non-coding | downstream | 343622 | 22833205 ~ 22834370 (-) |
| G1271297 | LOC106590247 | non-coding | upstream | 18261 | 23196452 ~ 23203364 (-) |
| G1271299 | NA | non-coding | upstream | 26396 | 23204587 ~ 23204788 (-) |
| G1271370 | NA | non-coding | upstream | 192257 | 23370448 ~ 23370759 (-) |
| G1271376 | NA | non-coding | upstream | 226696 | 23404887 ~ 23407463 (-) |
| G1271556 | NA | non-coding | upstream | 558638 | 23736829 ~ 23737030 (-) |
| G1269265 | NA | other | downstream | 1374640 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 2217903 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 2887319 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 2909504 | 20267966 ~ 20268488 (-) |
| G1266708 | LOC106590345 | other | downstream | 3724222 | 19435018 ~ 19453770 (-) |
| G1271421 | NA | other | upstream | 535164 | 23713355 ~ 23728939 (-) |
| G1274532 | LOC106590196 | other | upstream | 2868057 | 26046058 ~ 26048599 (-) |
| G1275015 | NA | other | upstream | 3333334 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 3376777 | 26554968 ~ 26562033 (-) |
| LOC110489888 | gli3 | other | upstream | 3392087 | 26566351 ~ 26694581 (-) |
