Gene
RNA
| Item | Value |
|---|---|
| gene id | G1271370 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 23370448 ~ 23370759 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1452390 | True | 312 | lncRNA | 0.44 | 1 | 23370448 | 23370759 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489826 | LOC106590306 | coding | downstream | 20061 | 23342993 ~ 23350387 (-) |
| LOC110489827 | NA | coding | downstream | 30658 | 23337882 ~ 23339790 (-) |
| LOC118938792 | NA | coding | downstream | 32725 | 23335472 ~ 23337723 (-) |
| acbd5a | acbd5 | coding | downstream | 95303 | 23253886 ~ 23275145 (-) |
| LOC110489819 | LOC106590300 | coding | downstream | 128134 | 23221692 ~ 23242314 (-) |
| LOC110489829 | LOC106590307 | coding | upstream | 408 | 23371167 ~ 23378986 (-) |
| LOC110489830 | LOC106590309 | coding | upstream | 9020 | 23379779 ~ 23385850 (-) |
| LOC110489831 | LOC106590310 | coding | upstream | 29006 | 23399765 ~ 23441392 (-) |
| psme2 | psme2 | coding | upstream | 75071 | 23445830 ~ 23451633 (-) |
| LOC110489841 | LOC106590235 | coding | upstream | 658039 | 24028798 ~ 24124676 (-) |
| G1271299 | NA | non-coding | downstream | 165660 | 23204587 ~ 23204788 (-) |
| G1271297 | LOC106590247 | non-coding | downstream | 167084 | 23196452 ~ 23203364 (-) |
| G1271287 | NA | non-coding | downstream | 192257 | 23177992 ~ 23178191 (-) |
| G1271285 | NA | non-coding | downstream | 194349 | 23175870 ~ 23176099 (-) |
| G1271201 | NA | non-coding | downstream | 343652 | 23023305 ~ 23026796 (-) |
| G1271376 | NA | non-coding | upstream | 34128 | 23404887 ~ 23407463 (-) |
| G1271556 | NA | non-coding | upstream | 366070 | 23736829 ~ 23737030 (-) |
| G1271557 | NA | non-coding | upstream | 366601 | 23737360 ~ 23737699 (-) |
| G1271559 | NA | non-coding | upstream | 368146 | 23738905 ~ 23739115 (-) |
| G1271585 | NA | non-coding | upstream | 401694 | 23772453 ~ 23774069 (-) |
| G1269265 | NA | other | downstream | 1567096 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 2410359 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 3079775 | 20290350 ~ 20290673 (-) |
| G1267414 | NA | other | downstream | 3101960 | 20267966 ~ 20268488 (-) |
| G1266708 | LOC106590345 | other | downstream | 3916678 | 19435018 ~ 19453770 (-) |
| G1271421 | NA | other | upstream | 342596 | 23713355 ~ 23728939 (-) |
| G1274532 | LOC106590196 | other | upstream | 2675489 | 26046058 ~ 26048599 (-) |
| G1275015 | NA | other | upstream | 3140766 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 3184209 | 26554968 ~ 26562033 (-) |
| LOC110489888 | gli3 | other | upstream | 3199519 | 26566351 ~ 26694581 (-) |
