G1271376


Basic Information

Item Value
gene id G1271376
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 23404887 ~ 23407463 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1452396
CACTGTGACTCTATCCTGTAcatagtgtactgtgactgtatcctgtacatagtgtactgtaactgtacgtagtgtactgtaactgtacgtagtgtactgtgactgtacGCAGTGTACTGTAACTGTATGTAATGCACTGTGACTCTATCCTGTAcatagtgtactgtgactgtatcctgtacatagtgtactgtaactttacgtagtgtactgtgactgtatcctgtacGTAGTGTGCTGTAACTGTAcatagtgtactgtgactgtatcctgtacgtagtgtgctgtgactgtatcctgtacgtagtgtgctgtgactgtatcctgtacgtagtgtactgtatcctgtacgtagtgtactgtatcctgtacgtagtgtactgtaactgtacatagtgtactgtaactgtacatagtgtactgtgactgtatcctgtacgtagtgtactgtaactgtacgtagtgtactgtaactgtacgtagtgtactgtgactgtacGCAGTGTACTGTAACTGTATGTAATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1452396 True 526 lncRNA 0.42 2 23404887 23407463

Neighbor

gene id symbol gene type direction distance location
LOC110489830 LOC106590309 coding downstream 19037 23379779 ~ 23385850 (-)
LOC110489829 LOC106590307 coding downstream 25901 23371167 ~ 23378986 (-)
LOC110489826 LOC106590306 coding downstream 54500 23342993 ~ 23350387 (-)
LOC110489827 NA coding downstream 65097 23337882 ~ 23339790 (-)
LOC118938792 NA coding downstream 67164 23335472 ~ 23337723 (-)
psme2 psme2 coding upstream 38367 23445830 ~ 23451633 (-)
LOC110489841 LOC106590235 coding upstream 621335 24028798 ~ 24124676 (-)
LOC110489842 LOC106590233 coding upstream 737777 24145240 ~ 24175377 (-)
gad2 gad2 coding upstream 843747 24251210 ~ 24264911 (-)
myo3a myo3a coding upstream 862428 24269891 ~ 24344532 (-)
G1271370 NA non-coding downstream 34128 23370448 ~ 23370759 (-)
G1271299 NA non-coding downstream 200099 23204587 ~ 23204788 (-)
G1271297 LOC106590247 non-coding downstream 201523 23196452 ~ 23203364 (-)
G1271287 NA non-coding downstream 226696 23177992 ~ 23178191 (-)
G1271285 NA non-coding downstream 228788 23175870 ~ 23176099 (-)
G1271556 NA non-coding upstream 329366 23736829 ~ 23737030 (-)
G1271557 NA non-coding upstream 329897 23737360 ~ 23737699 (-)
G1271559 NA non-coding upstream 331442 23738905 ~ 23739115 (-)
G1271585 NA non-coding upstream 364990 23772453 ~ 23774069 (-)
G1271612 NA non-coding upstream 427976 23835439 ~ 23836434 (-)
G1269265 NA other downstream 1601535 21802687 ~ 21803352 (-)
G1268555 LOC106590243 other downstream 2444798 20958372 ~ 20960089 (-)
G1267452 NA other downstream 3114214 20290350 ~ 20290673 (-)
G1267414 NA other downstream 3136399 20267966 ~ 20268488 (-)
G1266708 LOC106590345 other downstream 3951117 19435018 ~ 19453770 (-)
G1271421 NA other upstream 305892 23713355 ~ 23728939 (-)
G1274532 LOC106590196 other upstream 2638785 26046058 ~ 26048599 (-)
G1275015 NA other upstream 3104062 26511525 ~ 26512075 (-)
G1275016 LOC106590191 other upstream 3147505 26554968 ~ 26562033 (-)
LOC110489888 gli3 other upstream 3162815 26566351 ~ 26694581 (-)

Expression


Co-expression Network