G1270652


Basic Information

Item Value
gene id G1270652
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 23406660 ~ 23408002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1451627
acactatgTACAGGATAGAGTCACAGTGCATTACATACAGTTACAGTACACTGCgtacagtcacagtacactacgtacagttacagtacactacgtacagttacagtacactacgtacagttacagtacactacgtacaggatacagtcacagtacactatgtacagttacagtacactatgtacagttacagtacactacgtacaggatacagtcacagtacactacaTAGTTACAGTTCACTACgtacagtcacagtacactacgtacaggatacagtcacagtacacagtcacagtacactatgtacaggatacagttacagtacactatgtacaggatacagttacagtacactatgtacaggatacagtcacagtacactacatagttacagtacactacgtacaggatacagatacagtacactacgtacaggatacagtacactacgtacaggatacagtcacagcacactacgtacaggatacagtcacagcacactacgtacaggatacagtcacagtacactatgTACAGTTACAGCACACTACgtacaggatacagtcacagtacactacgtaaagttacagtacactatgtacaggatacagtcacagtacactatgTACAGGATAGAGTCACAGTGCATTACATACAGTTACAGTACACTGCgtacagtcacagtacactacgtacagttacagtacactacgtacagatacagtacactacgtacaggatacagtcacagtacactatgtacagttacagtacactacgt

Function

NR:

description
PREDICTED: protein IWS1 homolog A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1451627 True 784 TUCP 0.41 3 23406660 23408002

Neighbor

gene id symbol gene type direction distance location
LOC110510445 LOC106590311 coding upstream 7609 23387536 ~ 23399121 (+)
LOC110489828 LOC106590304 coding upstream 37848 23350408 ~ 23368812 (+)
LOC110489823 LOC106590302 coding upstream 64565 23275513 ~ 23342095 (+)
mastl LOC106590301 coding upstream 152874 23248095 ~ 23253786 (+)
ptchd3a LOC106590298 coding upstream 194763 23204933 ~ 23211897 (+)
LOC110489836 lsm5 coding downstream 31840 23439842 ~ 23445587 (+)
prex2 prex2 coding downstream 50106 23458108 ~ 23658840 (+)
LOC110489839 LOC106590236 coding downstream 258667 23666471 ~ 23836438 (+)
gig2e NA coding downstream 290178 23698180 ~ 23730175 (+)
LOC118938911 NA coding downstream 449411 23857413 ~ 23904392 (+)
G1270651 NA non-coding upstream 1346 23403079 ~ 23405314 (+)
G1270647 LOC106590309 non-coding upstream 21598 23384754 ~ 23385062 (+)
G1270640 NA non-coding upstream 31030 23375395 ~ 23375630 (+)
G1270639 LOC106590307 non-coding upstream 31387 23374790 ~ 23375273 (+)
G1270669 psme2 non-coding downstream 37836 23445838 ~ 23451494 (+)
G1270844 NA non-coding downstream 304792 23712794 ~ 23716562 (+)
G1270848 NA non-coding downstream 313087 23721089 ~ 23723367 (+)
G1270849 NA non-coding downstream 313286 23721288 ~ 23723683 (+)
G1270643 NA other upstream 29100 23377308 ~ 23377560 (+)
LOC110489812 rdh12 other upstream 269939 23132828 ~ 23146739 (+)
slc12a7b LOC106590280 other upstream 1612407 21729755 ~ 21794253 (+)
G1267949 pck2 other upstream 2565262 20840295 ~ 20841398 (+)
epb41l3a LOC106590342 other upstream 3726555 19598284 ~ 19680110 (+)
G1271852 LOC106584099 other downstream 838421 24246423 ~ 24250283 (+)
G1272220 LOC106590226 other downstream 980410 24388412 ~ 24403661 (+)
G1272573 NA other downstream 1333901 24741879 ~ 24787896 (+)

Expression


Co-expression Network